Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_K23
(902 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 9e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 9e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 45 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 8e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 41 1e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 3e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 38 9e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 37 3e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.004
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 33 0.005
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.006
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.077
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 26 0.41
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 26 0.41
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 26 0.41
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 26 0.41
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.94
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 8.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 52.4 bits (120), Expect = 5e-09
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPXSMQLDXWPT 510
P +++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P
Sbjct: 104 PPDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPF 160
Query: 511 DMQTCTFKFGSRMHNSDXMDFV-------IDXXXYSMFEXGXWDV 624
D QTC KFGS N D + +D Y ++ G WD+
Sbjct: 161 DQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDY--WKSGTWDI 203
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 189 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.4 bits (110), Expect = 9e-08
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQ 519
P + +WRPD+VL N A A +A + + G V W + + ++ +P D Q
Sbjct: 106 PSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQ 165
Query: 520 TCTFKFGSRMHNSDXMD 570
TC KFGS ++ +D
Sbjct: 166 TCVLKFGSWTYDGFKVD 182
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 138 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWG 323
W E+G
Sbjct: 92 WEPKEYG 98
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.4 bits (110), Expect = 9e-08
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 319 GAAALGWCPRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXS 486
G + + P E +W PD+VL N A G+Y + +A + G VSW +
Sbjct: 103 GGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCE 159
Query: 487 MQLDXWPTDMQTCTFKFGSRMHNSDXMD 570
+ ++ +P D Q+C KFGS +N +D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 26.2 bits (55), Expect = 0.41
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Frame = +3
Query: 138 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 296
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 297 LSWNAGEWG 323
L WN E+G
Sbjct: 95 LKWNPEEYG 103
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.0 bits (109), Expect = 1e-07
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQ 519
P + +WRPD+VL N A A +A ++ G V W + + ++ +P D Q
Sbjct: 102 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQ 161
Query: 520 TCTFKFGSRMHNSDXMD 570
TC KFGS ++ +D
Sbjct: 162 TCVMKFGSWTYDGFQVD 178
Score = 25.8 bits (54), Expect = 0.54
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +3
Query: 111 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 269
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 270 LQMNWIDKRLSWNAGEWG 323
++ +W D +L W+ E+G
Sbjct: 77 VEQSWYDYKLKWDPKEYG 94
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQ 519
P RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D Q
Sbjct: 101 PPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQ 160
Query: 520 TCTFKFGSRMHNSDXMDFVID----XXXYSMFEXGXWDV 624
C KFGS ++ +D + S G WD+
Sbjct: 161 RCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +3
Query: 90 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 254
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 255 RIQADLQMNWIDKRLSWNAGEWG 323
L++ W D + WN ++G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 195 MKFGSWTYDGNQVDLVL 211
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 195 MKFGSWTYDGNQVDLVL 211
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 5e-07
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSMQLDXWPT 510
P + +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 106 PSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPY 162
Query: 511 DMQTCTFKFGSRMHNSDXMD 570
D+QTC K GS ++ +D
Sbjct: 163 DVQTCVLKLGSWTYDGFKVD 182
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 138 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 302
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 303 WNAGEWG 323
W E+G
Sbjct: 92 WEPKEYG 98
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCD 126
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 44.8 bits (101), Expect = 1e-06
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 337 WCPRERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPXSMQLDXWPTD 513
+ P E +W PD+VL N A G + +A + G V W + + + +P D
Sbjct: 96 YVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFD 155
Query: 514 MQTCTFKFGSRMHNSDXMD 570
QTC KFGS ++ +D
Sbjct: 156 QQTCFMKFGSWTYDGIQID 174
Score = 32.3 bits (70), Expect = 0.006
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +3
Query: 93 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 251
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 252 VRIQADLQMNWIDKRLSWNAGEWGCSTWL 338
+ L+ W D + W+ E+G T L
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTEL 95
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCD 126
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.6 bits (98), Expect = 3e-06
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCD 126
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCT 528
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCD 126
Query: 529 FKFGSRMHNSDXMDFVI 579
KFGS ++ + +D V+
Sbjct: 127 MKFGSWTYDGNQVDLVL 143
Score = 29.5 bits (63), Expect = 0.044
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 228 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 323
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.9 bits (94), Expect = 8e-06
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSMQLDXWPT 510
P E +W PD+VL N A G+Y + +A + + G V W + + ++ +P
Sbjct: 98 PSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPF 154
Query: 511 DMQTCTFKFGSRMHNSDXMD 570
D QTC KFGS ++ +D
Sbjct: 155 DEQTCFMKFGSWTYDGYTVD 174
Score = 29.1 bits (62), Expect = 0.058
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Frame = +3
Query: 81 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 239
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 240 SESTVRIQADLQMNWIDKRLSWNAGEWG 323
T + ++ W D +L WN ++G
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYG 90
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPXSMQLDXWPTDM 516
P R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 83 PYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDE 142
Query: 517 QTCTFKFGS 543
Q C K+ S
Sbjct: 143 QRCVLKWAS 151
Score = 25.0 bits (52), Expect = 0.94
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 192 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 320
+V L+LH ++ E + + W D L WNA E+
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEF 74
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 40.7 bits (91), Expect = 2e-05
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 355 LWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTC 525
+W PD+ + N+ T G V ++GSVS + + + WP D C
Sbjct: 124 IWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRC 183
Query: 526 TFKFGSRMHNSDXMDFVIDXXXYSM 600
FGS +H+ + ++ +D + M
Sbjct: 184 RINFGSWVHSGEEVNIFLDKKGFHM 208
Score = 25.0 bits (52), Expect = 0.94
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 114 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 281
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 282 WIDKRLSWNAGEW 320
W D LSW ++
Sbjct: 99 WTDSHLSWKPSDF 111
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.9 bits (89), Expect = 3e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQ 519
ER+WRPD N + + R+S +G + + RL I M+L +P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 520 TCTFKFGS 543
+C GS
Sbjct: 175 SCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 38.7 bits (86), Expect = 7e-05
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +3
Query: 111 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 275
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 276 MNWIDKRLSWNAGEW 320
+ W L+W + E+
Sbjct: 88 LMWEQSHLTWKSSEF 102
Score = 27.5 bits (58), Expect = 0.18
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +1
Query: 355 LWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTC 525
+W PD+V+ ++ + D ++ V N+G++ + + WP D+ C
Sbjct: 115 IWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
Query: 526 TFKFGSRMHNSD 561
T S H S+
Sbjct: 174 TIHIASWSHGSN 185
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 38.3 bits (85), Expect = 9e-05
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 313 GSGAAALGWCPRERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPX 483
G AL R+W+PD N + T R+ +G V + RL I
Sbjct: 71 GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGC 130
Query: 484 SMQLDXWPTDMQTCTFKFGS 543
M L+ +P D Q C +FGS
Sbjct: 131 PMNLENFPMDTQRCPLQFGS 150
Score = 34.7 bits (76), Expect = 0.001
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 117 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 284
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 285 IDKRLSWNAGE 317
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 36.7 bits (81), Expect = 3e-04
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQ 519
E++W PD N + D R R+S +GSV++ R + M L +P D Q
Sbjct: 114 EKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQ 173
Query: 520 TCTFKFGS 543
CT + S
Sbjct: 174 NCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQT 522
R+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 523 CTFKFGSRMHNSDXMDFV 576
C+ + S +D + F+
Sbjct: 174 CSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 352 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQT 522
R+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 523 CTFKFGSRMHNSDXMDFV 576
C+ + S +D + F+
Sbjct: 174 CSLRMASYGWTTDDLVFL 191
Score = 31.5 bits (68), Expect = 0.011
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +3
Query: 60 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 221
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 222 H-ANIRESESTVRIQADLQMNWIDKRLSWN 308
A I + + +Q + W+D+RL +N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFN 98
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.004
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPXSMQLDXWPTDMQ 519
+ +WRPD NA + T + + + ++ ++ +L + +M +P D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 520 TCTFKFGSRMHNSDXMDFVID 582
C + S H +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 346 RERLWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPXSMQLDXWPTDM 516
R+ +W P V + N ++A T + + + +G V RL + ++L+ +P D+
Sbjct: 94 RDLIWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDV 153
Query: 517 QTCTFKFGSRMHN 555
Q C F S HN
Sbjct: 154 QECPLIFESWTHN 166
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +1
Query: 349 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPT 510
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 511 DMQTCTFKFGS 543
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +1
Query: 349 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPT 510
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 511 DMQTCTFKFGS 543
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.006
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +1
Query: 349 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXWPT 510
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 30 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 86
Query: 511 DMQTCTFKFGS 543
D Q C + S
Sbjct: 87 DRQLCHIEIES 97
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.7 bits (61), Expect = 0.077
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPXSMQLDXWPTD 513
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 514 MQTC 525
+Q C
Sbjct: 127 IQIC 130
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 424 RVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCTFKFGSRMHNSDXMDFV 576
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 424 RVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCTFKFGSRMHNSDXMDFV 576
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 424 RVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCTFKFGSRMHNSDXMDFV 576
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 424 RVSNNGSVSWIKRLDISTPXSMQLDXWPTDMQTCTFKFGSRMHNSDXMDFV 576
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.94
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 57 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 161
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 335 PSAAAPLPCVPTQS 294
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 316 SGAAALGWCPRERLWRPDVVLLNAAATTAGDYALRARVSNNGSV 447
+G A+ C +PD++ + A + GD +V NG++
Sbjct: 17 NGTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNL 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,941
Number of Sequences: 438
Number of extensions: 4775
Number of successful extensions: 93
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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