Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_K09
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0221 - 23385626-23386702                                         34   0.16 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    32   0.50 
05_05_0175 + 22966151-22967614                                         31   1.2  
09_06_0142 - 21107878-21109104                                         29   4.7  

>05_05_0221 - 23385626-23386702
          Length = 358

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 10  NQHYXVNFGPLTCMRLTGEPGTYDDNTDYNI 102
           +QH+ +NFGP T  R    P  YDD  D ++
Sbjct: 232 SQHFVINFGPATASRSGSPPLLYDDGDDGDV 262


>04_03_0018 -
           9434088-9434141,9434211-9434282,9434968-9435062,
           9435445-9435526,9435610-9435660,9435749-9435829,
           9435965-9436006,9436117-9436215,9438130-9438201,
           9438557-9438680,9438850-9439723,9440274-9440456,
           9440941-9442741,9442825-9443049,9443117-9443814,
           9444519-9444591
          Length = 1541

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 76  YDDNTDY-NIAVIYSEYDITTQTVFVSGD---DSLXITSTSCSPRLGRRFSTPFSHIQKR 243
           YDD  +  +I V +   +I +      G    + L ITST CSPR     + PFSH    
Sbjct: 352 YDDEVEVGSIDVFFEAVEIFSNLDSQEGQRDAEILSITSTECSPRAELMKTAPFSHFDME 411

Query: 244 V 246
           +
Sbjct: 412 I 412


>05_05_0175 + 22966151-22967614
          Length = 487

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -3

Query: 707 HE*VIRNPVAKHPLQKDRKRGGRNECELIN--VGGQSYPEEHKGGVITRRNRGKALSDKE 534
           HE V   P A+  L   R  GG    E++   VGG  Y  E +GG   ++ R + +SD  
Sbjct: 5   HERVAPPPAAE--LAGRRGGGGGEGMEIVTARVGGCGYGYEEEGGTRRQQRRRRKVSDGH 62

Query: 533 VRALLL 516
           V A LL
Sbjct: 63  VVAQLL 68


>09_06_0142 - 21107878-21109104
          Length = 408

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 28  NFGPLTCMRLTGEPGTYDDNTDYNIA 105
           +FG L C+ + GEPG Y   T + +A
Sbjct: 266 HFGDLPCVEVIGEPGRYFAETAFTLA 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,195,814
Number of Sequences: 37544
Number of extensions: 478037
Number of successful extensions: 1210
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)