Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_K07
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0345 + 4529272-4530514,4530634-4530740                           29   5.0  
09_01_0019 + 403078-404211                                             29   6.6  

>04_01_0345 + 4529272-4530514,4530634-4530740
          Length = 449

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +1

Query: 40  CDYHGCHG*RGIRXSIPEREPEKRLPHPRKAAGAQITHSRHGE 168
           CD+  CHG   +   I    P   LPH   A  A++  S  GE
Sbjct: 175 CDHRSCHGGPFLVALIWSHSPSPFLPHLPGATSARVYSSDTGE 217


>09_01_0019 + 403078-404211
          Length = 377

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 84  DSGEGA*ETATTSKEGSRRANYPLPARGGSDEK*RYG 194
           DSG GA ++A   K  SRR  +      GSD   R+G
Sbjct: 326 DSGSGASDSADDRKRSSRRRRHRKSESSGSDGDERHG 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,884,172
Number of Sequences: 37544
Number of extensions: 462174
Number of successful extensions: 1029
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)