Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_K07
(893 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 0.71
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 0.71
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 0.71
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 25 0.93
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 5.0
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 8.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 8.7
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 8.7
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 8.7
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 8.7
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 8.7
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 8.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 8.7
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.71
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -3
Query: 657 VAIRMPPVIPINH-----YLGVLKTNQNRTEII 574
+A+ PPV+P NH YL V++ N T+ I
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERNSGATDKI 385
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.71
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -3
Query: 657 VAIRMPPVIPINH-----YLGVLKTNQNRTEII 574
+A+ PPV+P NH YL V++ N T+ I
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERNSGATDKI 385
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.71
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -3
Query: 657 VAIRMPPVIPINH-----YLGVLKTNQNRTEII 574
+A+ PPV+P NH YL V++ N T+ I
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERNSGATDKI 385
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 25.0 bits (52), Expect = 0.93
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -3
Query: 696 MFVLRRSKNFTSNVAIRMPPVIPINHYLGVLKTNQNRTEIIFY 568
MFV R N + + HY+G L TN N E I Y
Sbjct: 152 MFVARHLAETPKNTS-----AVRYTHYIGTLATNDNILESISY 189
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 60 RVTGNQGFDSGEGA*ETATTSKEGSRRANYPLPARGGSDEK*RYG 194
R T Q ++ +G + +K S+ AN P PA GG + + G
Sbjct: 996 RYTPPQPANAQQG--QAQAQAKPQSQEANKPKPATGGKGTRPKRG 1038
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 643 HSYCDVRXEILGSSQDEHXRKHLP 714
H YC VR ++ R++LP
Sbjct: 428 HCYCPVRFGRKADPNGDYIRRYLP 451
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 820 QWVGGHFXKPKIWTP 864
Q GG F + IWTP
Sbjct: 86 QIYGGQFVRDLIWTP 100
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -1
Query: 383 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 285
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -1
Query: 383 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 285
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -1
Query: 383 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 285
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -1
Query: 383 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 285
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -1
Query: 383 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 285
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 8.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 680 RRKTNIXESICXXVFS 727
RR+ N+ E++C FS
Sbjct: 966 RRRLNVNETVCSDYFS 981
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,351
Number of Sequences: 438
Number of extensions: 5477
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -