Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_K01
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    31   1.4  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    31   1.4  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    30   1.9  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    30   1.9  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    30   1.9  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   3.3  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      29   3.3  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    28   7.7  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U20555-1|AAC46918.1|  839|Caenorhabditis elegans zinc finger pro...    28   7.7  
L23645-6|AAO91714.1|  635|Caenorhabditis elegans Zinc finger pro...    28   7.7  
L23645-4|AAK26137.1|  867|Caenorhabditis elegans Zinc finger pro...    28   7.7  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      28   7.7  

>Z81082-3|CAB03095.2|  603|Caenorhabditis elegans Hypothetical
           protein F42G4.3a protein.
          Length = 603

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = +3

Query: 501 IKSPIPYTNHPRLNIHFHQSPERRTK-RSSRRGL---KPPLSSXAPSAYFTPSSLGM--A 662
           I SP  Y+N PR    FH+ P   ++ + SR  L     P S+ +P   F+ S+L     
Sbjct: 111 IPSPPTYSNQPRPLGDFHRDPNALSQFQQSREALLSSTSPTSNYSPINKFSSSTLTQYAN 170

Query: 663 KGVSPPYF 686
           K  SPP F
Sbjct: 171 KSPSPPSF 178



 Score = 28.3 bits (60), Expect = 7.7
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 408 ATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPE-RRTKRS 584
           A P  SR T+   AL H A      GY  P ++  +   +  RL+    Q P+  RT R+
Sbjct: 39  APPKPSRPTVDASALQHAAARLRKTGYNEP-VRGDVENLSDGRLDRPHQQLPDGDRTYRA 97

Query: 585 SRRGLKPP 608
           + + L  P
Sbjct: 98  NLQQLAQP 105


>Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical
           protein T28F4.4 protein.
          Length = 717

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 489 INPIIKSPIPYTNHPRLNIHFHQSPERRTKRSSRRGLKPPLSSXAPSAYFTPSSLGMAKG 668
           IN  ++ PI   +    ++  + +P+   +R+    L PP    +PS Y  PSS+  +  
Sbjct: 205 INTNMREPIDQLHKDFYSMWSYDTPQTSPRRAQSASLSPPYGVPSPS-YSFPSSVASSAS 263

Query: 669 VSP 677
            SP
Sbjct: 264 SSP 266


>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 152 GTVSSTFDHPFSTPVLRSYWHRNQ 223
           G +++ F H  S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 152 GTVSSTFDHPFSTPVLRSYWHRNQ 223
           G +++ F H  S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 449 PYASSHPPLRSRLHQPDHQIPDS 517
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = +3

Query: 480 LGYINPI-IKSPIP--YTNHPRLNIHFHQSPERRTKRSSRRGLKPPLSSXAPSAYFTPSS 650
           +G ++P  I SP+P     HP++N  ++Q+P R+ K S       P+ S A S+Y TP++
Sbjct: 501 VGSLDPSQISSPLPPPIQQHPQMNQSWNQTPVRQYKPSFPS--SAPIGSGA-SSYSTPAA 557


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = +3

Query: 480 LGYINPI-IKSPIP--YTNHPRLNIHFHQSPERRTKRSSRRGLKPPLSSXAPSAYFTPSS 650
           +G ++P  I SP+P     HP++N  ++Q+P R+ K S       P+ S A S+Y TP++
Sbjct: 327 VGSLDPSQISSPLPPPIQQHPQMNQSWNQTPVRQYKPSFPS--SAPIGSGA-SSYSTPAA 383


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +2

Query: 155  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 319
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 320  SFRP*PQNTSHS 355
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +2

Query: 155  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 319
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 320  SFRP*PQNTSHS 355
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 183 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 287
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +2

Query: 155  TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 319
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 320  SFRP*PQNTSHS 355
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 414 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPE-RRTKRSSR 590
           P      I  + L+  + L CD  +   + K   P ++    N+H+   P+ RRT + S 
Sbjct: 514 PEKGPFAIAHVQLIRSSALLCDGEHDLAVYKIDNPGSHFDESNVHYMNLPDTRRTLKESI 573

Query: 591 RGLKP 605
              KP
Sbjct: 574 GSAKP 578


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 414 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPE-RRTKRSSR 590
           P      I  + L+  + L CD  +   + K   P ++    N+H+   P+ RRT + S 
Sbjct: 514 PEKGPFAIAHVQLIRSSALLCDGEHDLAVYKIDNPGSHFDESNVHYMNLPDTRRTLKESI 573

Query: 591 RGLKP 605
              KP
Sbjct: 574 GSAKP 578


>U20555-1|AAC46918.1|  839|Caenorhabditis elegans zinc finger
           protein protein.
          Length = 839

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
 Frame = +3

Query: 342 IPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPY 521
           IP T  L  TTA  T    N    P SS  T+G   L            I      P   
Sbjct: 316 IPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSEL 375

Query: 522 TNHP---RLNIHFHQSPERRTKRSSRRGLKPP 608
             +P   +L+   H+ P R T  +S   L PP
Sbjct: 376 NGYPAASQLSSFMHEIPARNT--TSVASLLPP 405


>L23645-6|AAO91714.1|  635|Caenorhabditis elegans Zinc finger
           protein protein 1,isoform c protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
 Frame = +3

Query: 342 IPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPY 521
           IP T  L  TTA  T    N    P SS  T+G   L            I      P   
Sbjct: 84  IPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSEL 143

Query: 522 TNHP---RLNIHFHQSPERRTKRSSRRGLKPP 608
             +P   +L+   H+ P R T  +S   L PP
Sbjct: 144 NGYPAASQLSSFMHEIPARNT--TSVASLLPP 173


>L23645-4|AAK26137.1|  867|Caenorhabditis elegans Zinc finger
           protein protein 1,isoform a protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
 Frame = +3

Query: 342 IPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPY 521
           IP T  L  TTA  T    N    P SS  T+G   L            I      P   
Sbjct: 316 IPSTAHLSATTASATPIMANGSTLPPSSETTVGTHCLQQLQIQSAAAAAITQNQIGPSEL 375

Query: 522 TNHP---RLNIHFHQSPERRTKRSSRRGLKPP 608
             +P   +L+   H+ P R T  +S   L PP
Sbjct: 376 NGYPAASQLSSFMHEIPARNT--TSVASLLPP 405


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 414 PSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPE-RRTKRSSR 590
           P      I  + L+  + L CD  +   + K   P ++    N+H+   P+ RRT + S 
Sbjct: 514 PEKGPFAIAHVQLIRSSALLCDGEHDLAVYKIDNPGSHFDESNVHYMNLPDTRRTLKESI 573

Query: 591 RGLKP 605
              KP
Sbjct: 574 GSAKP 578


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,649,988
Number of Sequences: 27780
Number of extensions: 334530
Number of successful extensions: 1164
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)