Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_J21
(883 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 55 1e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 2e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 2e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 2e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 38 1e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.043
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 28 0.099
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.40
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.92
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.92
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 4.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 54.8 bits (126), Expect = 1e-09
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Frame = +1
Query: 97 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 255
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 256 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VPSERLWRPDVVLLNAAATTAGDYAL-RAR 429
+ L+ W D + W+ E+G T L VPSE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 430 VSNNGSVSW 456
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSXMHN 559
+P D QTC KFGS ++
Sbjct: 152 FPFDQQTCFMKFGSWTYD 169
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 50.4 bits (115), Expect = 2e-08
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Frame = +1
Query: 115 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 273
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VPSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 447
++ +W D +L W+ E+G L VPS+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 448 VSW 456
V W
Sbjct: 137 VEW 139
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHN 559
+ ++ +P D QTC KFGS ++
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYD 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.4 bits (115), Expect = 2e-08
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Frame = +1
Query: 85 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 243
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 244 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVPSERLWRPDVVLLNAAATTAGDYAL 420
T + ++ W D +L WN ++G T VPSE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 421 ----RARVSNNGSVSW 456
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHN 559
+ ++ +P D QTC KFGS ++
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYD 169
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 49.2 bits (112), Expect = 5e-08
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 300
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 301 LSWNAGEWGCSTWL-VPSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 456
L WN E+G L VPSE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 25.8 bits (54), Expect = 0.53
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEM 571
+ ++ +P D Q+C KFGS +N ++
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQV 186
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.0 bits (109), Expect = 1e-07
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VPSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 456
W E+G L VPS+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHN 559
+ ++ +P D QTC KFGS ++
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYD 177
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 115 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 279
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 280 MNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVL 381
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 26.2 bits (55), Expect = 0.40
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSXMHNSDEM 571
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 196 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPD 372
+V L+LH ++ E + + W D L WNA E+ G VP R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 373 VVLLNAAATTAGDYALRAR--VSNNGSVSW 456
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 47.2 bits (107), Expect = 2e-07
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Frame = +1
Query: 94 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 258
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 259 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VPSERLWRPDVVLLNAA-ATTAGDYALRARV 432
L++ W D + WN ++G L +P RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 433 SNNGS 447
NNG+
Sbjct: 131 KNNGT 135
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEM 571
+ + +P D Q C KFGS ++ ++
Sbjct: 150 IDITWFPFDDQRCEMKFGSWTYDGFQL 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.8 bits (106), Expect = 3e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRARVSNNGS 447
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEMXFVI 583
+ + +P D Q C KFGS ++ +++ V+
Sbjct: 181 IDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.8 bits (106), Expect = 3e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 406 GDYALRARVSNNGS 447
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEMXFVI 583
+ + +P D Q C KFGS ++ +++ V+
Sbjct: 181 IDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGS 447
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEMXFVI 583
+ + +P D Q C KFGS ++ +++ V+
Sbjct: 113 IDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVPSERLWR 366
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G +P +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 367 PDVVLLNAAATTAGDYALRAR----VSNNGSVSW 456
PD+VL N A G+Y +R + + NG V W
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
Score = 30.3 bits (65), Expect = 0.025
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 488 SMQLDXWPNDMQTCTFKFGSXMHNSDEMXFVI-*QKNI----QYVRVRAWDV 628
++ + +P D QTC KFGS N D++ + KN Y + WD+
Sbjct: 152 TIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 8e-07
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VPSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 456
W E+G L VPS+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 26.2 bits (55), Expect = 0.40
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 488 SMQLDXWPNDMQTCTFKFGSXMHN 559
S+ ++ +P D+QTC K GS ++
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYD 177
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGS 447
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.70
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEMXFVI 583
M + +P D Q C KFGS ++ +++ V+
Sbjct: 113 MDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGS 447
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSXMHNSDEMXFVI 583
+P D Q C KFGS ++ +++ V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGS 447
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEMXFVI 583
+ + +P D Q C KFGS ++ +++ V+
Sbjct: 113 IDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGS 447
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSXMHNSDEMXFVI 583
+P D Q C KFGS ++ +++ V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAA-ATTA 405
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGS 447
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 25.8 bits (54), Expect = 0.53
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 491 MQLDXWPNDMQTCTFKFGSXMHNSDEMXFVI 583
M + +P D Q C KFGS ++ +++ V+
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.0 bits (99), Expect = 2e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 288
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 289 IDKRLSWNAGEWGCSTWLVPSERLWRPDVVLLN 387
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 27.9 bits (59), Expect = 0.13
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 464 RLDISTPISMQLDXWPNDMQTCTFKFGSXMHNSDEMXF 577
RL I M L+ +P D Q C +FGS + ++ +
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIY 160
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.3 bits (85), Expect = 9e-05
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Frame = +1
Query: 118 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 285
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 286 WIDKRLSWNAGEW-GCSTWLVPSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 453
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 454 WDKALGH 474
++ H
Sbjct: 159 CVPSVKH 165
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSXMHNSDEMXFVI*QKNIQ---YVRVRAWDVTVCQAVQ 649
WP D C FGS +H+ +E+ + +K Y WD V +A +
Sbjct: 176 WPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFKVIKATK 226
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 37.9 bits (84), Expect = 1e-04
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Frame = +1
Query: 64 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 225
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 226 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVPSERLWRPDVVLLN 387
A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.002
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 130 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 294
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 295 KRLSWNAGEWGCSTWLVPSERLWRPDVVLLN 387
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.5 bits (63), Expect = 0.043
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 464 RLDISTPISMQLDXWPNDMQTCTFKFGSXMHNSDEMXF 577
+L + +M +P+D Q C + S H +DEM F
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIF 193
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 28.3 bits (60), Expect = 0.099
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = +2
Query: 458 IKRLDISTPISMQLDXWPNDMQTCTFKFGSXMHNSDEMXFV 580
+ +L + +M+ + +P+D Q C+ S H + ++ F+
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 26.2 bits (55), Expect = 0.40
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 464 RLDISTPISMQLDXWPNDMQTCTFKFGSXMHNSDEM 571
RL + ++L+ +P D+Q C F S HN +M
Sbjct: 135 RLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.92
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 196 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVPSE---R 357
++V+ + + N I + R+ ++ +WI+ RL E G +P E
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 358 LWRPDVVLLNA 390
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.92
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 61 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 165
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 339 PSAAAPLPCVPTQS 298
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 509 PNDMQTCTFKFGSXMHNSDEMXFVI*QKNIQYVR 610
P D++ FK+G H + + + KN++Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,247
Number of Sequences: 438
Number of extensions: 4570
Number of successful extensions: 82
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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