Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_J16
(894 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 5e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 52 5e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 50 2e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 50 2e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 4e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 50 4e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 49 5e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 49 5e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 3e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 8e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 45 1e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 6e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 9e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 30 0.025
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.033
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.31
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 57.2 bits (132), Expect = 2e-10
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAAATTXGDYAL-RAR 408
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 409 VSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
+ G V + + + +P D QTC K
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMK 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.8 bits (121), Expect = 4e-09
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
V + + ++ +P D QTC K
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.4 bits (120), Expect = 5e-09
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGEWGXSTWLVSSERLWRPDVVLLNAAAT---TXGDYALRARVSNNGSVSGI 438
+D+RL++ G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 439 KRLDISTPISMQLDXWPNDMQTC 507
RL I M L+ +P D Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.4 bits (120), Expect = 5e-09
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 286 WNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSGIKRLDIST 459
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 460 PISMQLDXWPNDMQTCTFK 516
+ + +P D Q C K
Sbjct: 178 TCKIDITWFPFDDQHCDMK 196
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.4 bits (120), Expect = 5e-09
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 286 WNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSGIKRLDIST 459
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS + +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 460 PISMQLDXWPNDMQTCTFK 516
+ + +P D Q C K
Sbjct: 178 TCKIDITWFPFDDQHCDMK 196
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.4 bits (120), Expect = 5e-09
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGXSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSGIKRLD 450
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 451 ISTPISMQLDXWPNDMQTCTFKV 519
+ S+ ++ +P D+QTC K+
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKL 171
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 51.6 bits (118), Expect = 9e-09
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTX 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
G Y V++NGS + + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.2 bits (117), Expect = 1e-08
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 258
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGEW-GXSTWLVSSERLWRPDVVL--LNAAATTXGDYALRARVSNNGSV 429
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 430 SGIKRLDISTPISMQLDXWPNDMQTCTFKV 519
+ + WP D+ CT +
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHI 177
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.2 bits (117), Expect = 1e-08
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGXSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSGIKRLDIST 459
W E+G L V S+ +WRPD+VL NA A +A + + G V +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 460 PISMQLDXWPNDMQTCTFK 516
+ ++ +P D QTC K
Sbjct: 152 SCEIDVEYFPFDEQTCVLK 170
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTX 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
G Y V+++GS + + M + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMK 128
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTX 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
G Y V+++GS + + M + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMK 128
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 50.4 bits (115), Expect = 2e-08
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 286 WNAGEWGXSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSGIKRLD 450
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 451 ISTPISMQLDXWPNDMQTCTFK 516
+ + ++ +P D Q+C K
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMK 175
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTX 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
G Y V+++GS + + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.6 bits (113), Expect = 4e-08
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRILADLQMNWIDKRLSWNAGEWGX-STWLVSSERLWRPDVVLLNAAATTXGDYAL- 399
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 400 ---RARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
+A + + G V + + ++ +P D QTC K
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMK 162
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 49.6 bits (113), Expect = 4e-08
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARV 411
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 412 SNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
NNG+ + + + + +P D Q C K
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMK 165
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTX 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
G Y V+++GS + + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMK 128
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAA-ATTX 384
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
G Y V+++GS + + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMK 128
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 49.2 bits (112), Expect = 5e-08
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGXSTWL-VSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAAATTXGDYALRAR----VSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTF 513
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 514 K 516
K
Sbjct: 168 K 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GXSTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAAATTXGDYALRAR--VSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFK 516
+L N A + VS+ G V + + + ++ +P D Q C K
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.8 bits (106), Expect = 3e-07
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGXSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSGIKRLDISTPISMQLDXWPNDMQTCTFKV 519
GS++ RL I+ M L +P D Q C ++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGXSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSGIKRLDISTPISMQLDXWPNDMQTCTFKV 519
GS++ RL I+ M L +P D Q C ++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.2 bits (102), Expect = 8e-07
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 279
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGXSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSGIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDXWPNDMQTCTFKV 519
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 44.8 bits (101), Expect = 1e-06
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 8/141 (5%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 273
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLSWNAGEWGXSTWLVSSERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVSGIKR 444
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 445 LDISTPISMQLDXWPNDMQTC 507
L I M+L +P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.0 bits (99), Expect = 2e-06
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 264
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 265 WIDKRLSWNAGEWGXSTWL-VSSERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVS 432
W D LSW ++ ++ V S+ +W PD+ + N+ T + V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 433 GIKRLDISTPISMQLDXWPNDMQTC 507
+ + + WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.3 bits (95), Expect = 6e-06
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 279
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGXSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSGIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDXWPNDMQTCTFKV 519
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Frame = +1
Query: 124 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 291
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 292 AGEWGXSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSGIKRLDISTP 462
E + +E++W PD N + D R R+S +GSV+ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 463 ISMQLDXWPNDMQTCTFKV 519
M L +P D Q CT ++
Sbjct: 161 CMMDLHYYPLDSQNCTVEI 179
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.9 bits (84), Expect = 1e-04
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGXSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSN 417
W D RL++ G T V SE +W PD +N ATT ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 418 NGSVSGIKRLDISTPISMQLDXWPNDMQTCTFKV 519
+GS++ RL I+ M L +P D Q C ++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLSW-NAGEWGXSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 GIKRLDISTPISMQLDXWPNDMQTCTFKV 519
+ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLSW-NAGEWGXSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 GIKRLDISTPISMQLDXWPNDMQTCTFKV 519
+ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.1 bits (77), Expect = 9e-04
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 261
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 262 NWIDKRLSW-NAGEWGXSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 432
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 433 GIKRLDISTPISMQLDXWPNDMQTCTFKV 519
+ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.025
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Frame = +1
Query: 175 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGXSTWLVSSERLWRP 348
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 349 DV--VLLNAAATTXGDYALRARVSNNGSVSGIKRLDISTPISMQLDXWPNDMQTCTFKV 519
D ++ R+ NG+V+ + R + +L+ +P D C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.9 bits (64), Expect = 0.033
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 258
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 259 MNWIDKRLSW--NAGEWGXSTWLVSSERLWRPDVVLLNAAATTXGDYALRAR---VSNNG 423
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 424 SVSGIKRLDISTPISMQLDXWPNDMQTCTFKV 519
++ + +L + +M+ + +P+D Q C+ +
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMI 150
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.31
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Frame = +1
Query: 175 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN--AGEWGXSTWLVSSE---R 336
++V+ + + N I + R+ ++ +WI+ RL E G + E
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 337 LWRPDVVLLNAAATTXGDYALRARVSN-----NGSVSGIKRLDISTPISMQLDXWPNDMQ 501
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 502 TC 507
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 10/135 (7%)
Frame = +1
Query: 145 YDRESPP--DSKIVVNLTLHLRHANIRE-SESTVRILADL--QMNWIDKRLSWNAGEWGX 309
YD+ PP D + V + H+ + E+++ AD+ W D RL
Sbjct: 48 YDKMRPPKKDGQATV-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRLRLPENMTSE 106
Query: 310 STWLVSS--ERLWRPDVVLLNAAATTXGDYALRAR---VSNNGSVSGIKRLDISTPISMQ 474
L + +WRPD NA + T + + + ++ + +L + +M
Sbjct: 107 YRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMN 166
Query: 475 LDXWPNDMQTCTFKV 519
+P+D Q C ++
Sbjct: 167 FLIYPHDTQECKLQM 181
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,923
Number of Sequences: 438
Number of extensions: 4369
Number of successful extensions: 65
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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