Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_J10
(907 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 60 2e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 59 5e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 52 1e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 52 1e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 2e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 5e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 49 7e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 49 7e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 49 7e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 3e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 3e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 2e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 40 2e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 37 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 31 0.019
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.41
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.8
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 60.5 bits (140), Expect = 2e-11
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Frame = +2
Query: 89 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 256
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 257 IDKRLSWNAGEWDCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 427
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 428 KRLDISTPISMQLDNXAXDMQTCTFKFG 511
RL I M L+N D Q C +FG
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 59.3 bits (137), Expect = 5e-11
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Frame = +2
Query: 65 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 223
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 224 VRIQADLQMNWIDKRLSWNAGEWDCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 397
+ L+ W D + W+ E+ T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 398 VSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
+ G V W + + + D QTC KFG
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFG 164
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 55.2 bits (127), Expect = 8e-10
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Frame = +2
Query: 83 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 241
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 242 LQMNWIDKRLSWNAGEWDCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 415
++ +W D +L W+ E+ L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 416 VSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
V W + + ++ D QTC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 53.2 bits (122), Expect = 3e-09
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = +2
Query: 161 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWD-CSTWLVSSERLWR 334
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 335 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTF 502
PD+VL N A G+Y +R + + NG V W+ + ++ + D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 503 KFG 511
KFG
Sbjct: 168 KFG 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Frame = +2
Query: 53 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 211
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 212 SESTVRIQADLQMNWIDKRLSWNAGEWD-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 388
T + ++ W D +L WN ++ T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 389 ----RARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
+A + + G V W + + ++ D QTC KFG
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFG 164
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 274
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 275 WNAGEWDCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 448
W E+ L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 449 PISMQLDNXAXDMQTCTFKFG 511
+ ++ D QTC KFG
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFG 172
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.0 bits (119), Expect = 7e-09
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Frame = +2
Query: 110 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 268
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 269 LSWNAGEWDCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 433
L WN E+ L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 434 LDISTPISMQLDNXAXDMQTCTFKFG 511
+ + ++ D Q+C KFG
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFG 177
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.6 bits (118), Expect = 1e-08
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V++NGS ++ + + + D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.6 bits (118), Expect = 1e-08
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V++NGS ++ + + + D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V++NGS ++ + + + D Q C KFG
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V+++GS ++ + M + D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFG 130
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.4 bits (115), Expect = 2e-08
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +2
Query: 83 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 247
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 248 MNWIDKRLSWNAGEWD-CSTWLVSSERLWRPDVVL 349
+ W L+W + E+D ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V+++GS ++ + M + D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFG 130
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.0 bits (114), Expect = 3e-08
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 274
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 275 WNAGEWDCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 439
W E+ L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 440 ISTPISMQLDNXAXDMQTCTFKFG 511
+ S+ ++ D+QTC K G
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLG 172
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V+++GS ++ + + + D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.2 bits (112), Expect = 5e-08
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Frame = +2
Query: 98 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 262
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 263 KRLSWNAGEWDCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 433
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 434 LDISTPISMQLDNXAXDMQTCTFKFG 511
L I M+L N D Q+C G
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILG 181
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V+++GS ++ + + + D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
G Y V+++GS ++ + + + D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFG 130
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.8 bits (111), Expect = 7e-08
Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Frame = +2
Query: 41 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NI 205
+ + A+A++ + +++ LL TY+ P +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 206 RESESTVRIQADLQMNWIDKRLSWNAGEWDCSTWL-VSSERLWRPDVVLLNAA-ATTAGD 379
E + L++ W D + WN ++ L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 380 YALRARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
Y V NNG+ ++ + + + D Q C KFG
Sbjct: 124 YPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Frame = +2
Query: 164 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-DCSTWLVSSERLWRPD 340
+V L+LH ++ E + + W D L WNA E+ V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 341 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCTFKF 508
+L N A + VS+ G V W+ + + ++ D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 45.6 bits (103), Expect = 6e-07
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Frame = +2
Query: 86 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 253
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 254 WIDKRLSWNAGEWDCSTWL-VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 421
W D LSW ++D ++ V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 422 WIKRLDISTPISMQLDNXAXDMQTCTFKFG 511
+ + + + D C FG
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFG 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 3e-06
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 268
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 269 LSWN--AGEWDCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 433
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 434 LDISTPISMQLDNXAXDMQTCTFK 505
+ ++ M L D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.7 bits (91), Expect = 2e-05
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 268
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 269 LSWN--AGEWDCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 433
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 434 LDISTPISMQLDNXAXDMQTCTFK 505
+ ++ M L D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 40.3 bits (90), Expect = 2e-05
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +2
Query: 89 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 256
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 257 IDKRLSWNAGEWDCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 409
D RL++ T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 410 GSVSWIKRLDISTPISMQLDNXAXDMQTC 496
GS++ RL I+ M L D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.1 bits (87), Expect = 5e-05
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Frame = +2
Query: 89 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 256
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 257 IDKRLSWNAGEWDCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 409
D RL++ T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 410 GSVSWIKRLDISTPISMQLDNXAXDMQTC 496
GS++ RL I+ M L D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 36.7 bits (81), Expect = 3e-04
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +2
Query: 203 IRESESTVRIQADLQMNWIDKRLSWNAGEWDCSTWLVSSERLWRPDVVLLNAAATTAGDY 382
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 383 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNXAXDMQTCT 499
R R+S +GSV++ R + M L D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 30.7 bits (66), Expect = 0.019
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 254 WIDKRLSWNAGEWDCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 406
W D RL++ T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 407 NGSVSWIKRLDISTPISMQLDNXAXDMQTC 496
+GS++ RL I+ M L D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.41
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Frame = +2
Query: 164 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS---WNAGEWDCSTWLVSS--ER 325
++V+ + + N I + R+ ++ +WI+ RL + E D L +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 326 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNXAXDMQ 490
LW+PD LNA + AL + S+ N +V + R+ M+ D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 491 TC 496
C
Sbjct: 129 IC 130
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 106 GQ*CCVFAFCRTSYSTSEEKXVTRII 29
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,678
Number of Sequences: 438
Number of extensions: 4387
Number of successful extensions: 68
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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