Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_J02
(883 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 57 2e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 1e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 2e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 50 4e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 49 7e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 46 3e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 5e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 43 3e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 36 7e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 36 7e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 36 7e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 7e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 28 0.099
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.70
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.92
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 8.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.8 bits (131), Expect = 2e-10
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +1
Query: 121 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 279
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 280 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 453
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 454 VSNNGSVSWIKRLDISTPISMQLDNWPNXMQTC 552
+ G V W + + + +P QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.4 bits (125), Expect = 1e-09
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 145 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 312
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 313 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 483
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 484 KRLDISTPISMQLDNWPNXMQTC 552
RL I M L+N+P Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.0 bits (119), Expect = 7e-09
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Frame = +1
Query: 139 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 297
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 298 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 471
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 472 VSWIKRLDISTPISMQLDNWPNXMQTC 552
V W + + ++ +P QTC
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTC 163
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.8 bits (116), Expect = 2e-08
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Frame = +1
Query: 109 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 267
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 268 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 444
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 445 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTC 552
+A + + G V W + + ++ +P QTC
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.4 bits (115), Expect = 2e-08
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Frame = +1
Query: 166 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 330
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 331 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 495
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 496 ISTPISMQLDNWPNXMQTC 552
+ S+ ++ +P +QTC
Sbjct: 149 YKSSCSIDVEFFPYDVQTC 167
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.4 bits (115), Expect = 2e-08
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Frame = +1
Query: 166 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 330
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 331 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 504
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 505 PISMQLDNWPNXMQTC 552
+ ++ +P QTC
Sbjct: 152 SCEIDVEYFPFDEQTC 167
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 49.6 bits (113), Expect = 4e-08
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Frame = +1
Query: 166 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 330
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 331 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 495
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 496 ISTPISMQLDNWPNXMQTC 552
+ + ++ +P Q+C
Sbjct: 154 YKSSCEINVEYFPFDEQSC 172
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 48.8 bits (111), Expect = 7e-08
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +1
Query: 217 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 390
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 391 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNXMQTC 552
PD+VL N A G+Y +R + + NG V W+ + ++ + +P QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Frame = +1
Query: 139 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 303
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 304 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 474
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 475 SWIKRLDISTPISMQLDN--WPNXMQTCTFXV 564
+ TP+ + D+ WP + CT +
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHI 177
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +1
Query: 166 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 330
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 331 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 483
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.6 bits (108), Expect = 2e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +1
Query: 166 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 330
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 331 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 483
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.2 bits (107), Expect = 2e-07
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +1
Query: 154 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 318
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 319 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 489
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 490 LDISTPISMQLDNWPNXMQTC 552
L I M+L N+P Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 429
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 430 GDYALRARVSNNGSVSWI 483
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +1
Query: 220 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 396
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 397 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNXMQTC 552
+L N A + VS+ G V W+ + + ++ +P Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +1
Query: 256 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 429
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 430 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTC 552
G Y V+++GS ++ + M + +P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.0 bits (104), Expect = 5e-07
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 12/175 (6%)
Frame = +1
Query: 88 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 249
++LL FLL + + + ++D++L YD E+ D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 250 H-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 420
A I + + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 421 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXVPVLG 576
+ + R+ NGSV + R+ ++ M L +P Q C+ + G
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYG 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +1
Query: 256 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 429
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 430 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTC 552
G Y V+++GS ++ + M + +P Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 429
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 430 GDYALRARVSNNGSVSWI 483
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 429
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 430 GDYALRARVSNNGSVSWI 483
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 429
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 430 GDYALRARVSNNGSVSWI 483
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.8 bits (101), Expect = 1e-06
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Frame = +1
Query: 118 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 282
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 283 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 456
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 457 SNNGSVSWIKRLDISTPISMQLDNWPNXMQTC 552
NNG+ ++ + + + +P Q C
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Frame = +1
Query: 145 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 312
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 313 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 465
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 466 GSVSWIKRLDISTPISMQLDNWPNXMQTCTFXVPVLG 576
GS++ RL I+ M L +P Q C + G
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 160
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.2 bits (97), Expect = 3e-06
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 12/175 (6%)
Frame = +1
Query: 88 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 249
++LL FLL + + + ++D++L YD E+ D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 250 H-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 420
+ I + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 421 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXVPVLG 576
+ + R+ NGSV + R+ ++ M L +P Q C+ + G
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYG 182
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Frame = +1
Query: 145 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 312
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 313 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 465
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 466 GSVSWIKRLDISTPISMQLDNWPNXMQTCTFXVPVLG 576
GS++ RL I+ M L +P Q C + G
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 160
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Frame = +1
Query: 67 HKMSTTYI-ILLPFLLTCAIASAAEC---ENATSLSLMIDSLLATYDRESPPD---SKIV 225
H+M I ILL + A AS + +++ I +L YD P+ ++
Sbjct: 3 HRMWLQQIFILLQMIHLIAWASLENTGISDRLENVTQTISRILDGYDIRLRPNFGGEPLL 62
Query: 226 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 402
V + L + + I E I L W D+RL+++ E + +E++W PD
Sbjct: 63 VGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTF 122
Query: 403 LLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXVPVL 573
N + D R R+S +GSV++ R + M L +P Q CT +
Sbjct: 123 FANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESY 182
Query: 574 G 576
G
Sbjct: 183 G 183
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.5 bits (78), Expect = 7e-04
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 10/171 (5%)
Frame = +1
Query: 82 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 240
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 241 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 411
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 412 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXV 564
R+ NG+V+++ R + +L+ +P C+F +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.5 bits (78), Expect = 7e-04
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 10/171 (5%)
Frame = +1
Query: 82 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 240
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 241 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 411
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 412 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXV 564
R+ NG+V+++ R + +L+ +P C+F +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.5 bits (78), Expect = 7e-04
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 10/171 (5%)
Frame = +1
Query: 82 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 240
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 241 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 411
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 412 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXV 564
R+ NG+V+++ R + +L+ +P C+F +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.5 bits (78), Expect = 7e-04
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Frame = +1
Query: 310 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 462
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 463 NGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXVPVLG 576
+GS++ RL I+ M L +P Q C + G
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 99
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 28.3 bits (60), Expect = 0.099
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Frame = +1
Query: 220 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 393
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 394 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNXMQTCTFXV 564
D ++ R+ NG+V+++ R + +L+ +P C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.70
Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Frame = +1
Query: 220 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 381
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 382 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNXMQ 546
LW+PD LNA + AL + S+ N +V + R+ M+ +P +Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 547 TCTFXV 564
C +
Sbjct: 129 ICPIYI 134
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.92
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 85 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 189
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 376 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNXMQ 546
+ +WRPD NA + T + + + ++ ++ +L + +M +P+ Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 547 TC 552
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 363 PSAAAPFPCVPTQS 322
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,335
Number of Sequences: 438
Number of extensions: 5182
Number of successful extensions: 71
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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