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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_I23
         (967 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    48   1e-07
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    47   3e-07
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    43   5e-06
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    42   6e-06
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    41   2e-05
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    40   4e-05
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    39   6e-05
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    39   6e-05
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    39   6e-05
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    39   6e-05
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    39   6e-05
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    39   6e-05
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    39   6e-05
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    39   6e-05
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    38   1e-04
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    38   1e-04
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    38   2e-04
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    36   4e-04
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    36   5e-04
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    35   0.001
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    35   0.001
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    33   0.004
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    33   0.005
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   1.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.5  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 48.0 bits (109), Expect = 1e-07
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
 Frame = +3

Query: 150 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 314
           C++ TS S +      L   YDRD  P+ K    ++  L ++H N+ E   TV     L+
Sbjct: 28  CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87

Query: 315 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           + W    L+W + E+   ++  V S  +W PD+V+
Sbjct: 88  LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 46.8 bits (106), Expect = 3e-07
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
 Frame = +3

Query: 132 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 290
           I SA  C        + D LL+ Y+R   P S     +VV L L L      N+++   T
Sbjct: 9   ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68

Query: 291 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 416
             +   L+  W D +  W+  E+G  T L V SE +W PD+VL
Sbjct: 69  TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVL 109


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 42.7 bits (96), Expect = 5e-06
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
 Frame = +3

Query: 156 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 323
           N +++S ++D+LL  YD    PD       V + + +R    I E + T  +    + +W
Sbjct: 2   NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61

Query: 324 IDKRLSWNAGEWGCSTWLVSSERLWRPD 407
           +D+RL++  G+   +  +    R+W+PD
Sbjct: 62  VDRRLAFQGGKETLALSISMLARIWKPD 89


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
 Frame = +3

Query: 123 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 281
           +C +A        +    + D LL+ Y+R   P      ++ V + L L      N++  
Sbjct: 6   SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65

Query: 282 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 416
             T  +   ++  W D +L WN  ++G   T  V SE +W PD+VL
Sbjct: 66  IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVL 109


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
 Frame = +3

Query: 150 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 308
           C        + D LL+ Y++   P   +   LT+ ++         N++    T  +   
Sbjct: 19  CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76

Query: 309 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 416
           ++ +W D +L W+  E+G    L V S+ +WRPD+VL
Sbjct: 77  VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
 Frame = +3

Query: 177 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 335
           + D LL+ Y+R   P       LT+ L          N++    T  +   ++  W D +
Sbjct: 37  LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94

Query: 336 LSWNAGEWGCSTWL-VSSERLWRPDVVL 416
           L WN  E+G    L V SE +W PD+VL
Sbjct: 95  LKWNPEEYGGVEMLYVPSENIWLPDIVL 122


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 93  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 143


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 39.1 bits (87), Expect = 6e-05
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 267 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 416
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++
Sbjct: 93  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 143


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 37.9 bits (84), Expect = 1e-04
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +3

Query: 177 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 341
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I      ++ +W D +L 
Sbjct: 32  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91

Query: 342 WNAGEWGCSTWL-VSSERLWRPDVVL 416
           W   E+G    L V S+ +WRPD+VL
Sbjct: 92  WEPKEYGGVKMLHVPSDHIWRPDIVL 117


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 37.9 bits (84), Expect = 1e-04
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +3

Query: 177 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 341
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I      ++ +W D +L 
Sbjct: 32  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91

Query: 342 WNAGEWGCSTWL-VSSERLWRPDVVL 416
           W   E+G    L V S+ +WRPD+VL
Sbjct: 92  WEPKEYGGVKMLHVPSDHIWRPDIVL 117


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 37.5 bits (83), Expect = 2e-04
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 231 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 407
           +V  L+LH    ++ E    +     +   W D  L WNA E+ G     V   R+WRPD
Sbjct: 33  VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91

Query: 408 VVL 416
            +L
Sbjct: 92  TIL 94


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +3

Query: 228 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 401
           K+ VN  L  ++  N+ E    ++    L+  W D +L W+  ++ G     +  +++W+
Sbjct: 51  KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110

Query: 402 PDVVL 416
           PD+VL
Sbjct: 111 PDIVL 115


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 35.9 bits (79), Expect = 5e-04
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
 Frame = +3

Query: 177 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 335
           ++D++L  YD    P      D   +V + L +R  A I + +    +Q   +  W+D+R
Sbjct: 35  VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94

Query: 336 LSWN--AGEWGCSTWLVSSERLWRPDVVLSKRGCXHRRGLRSP 458
           L +N   G     T L  + R+W PD+  S     H   +  P
Sbjct: 95  LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMP 136


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 35.1 bits (77), Expect = 0.001
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = +3

Query: 153 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 320
           ++ T+L  +   L   YD +  P S  +I  N+T+ L  +     +  S + + + + + 
Sbjct: 39  DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98

Query: 321 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLSKRG 428
           W D  LSW   ++ G +   V S+ +W PD+ +   G
Sbjct: 99  WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSG 135


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 35.1 bits (77), Expect = 0.001
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
 Frame = +3

Query: 129 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 293
           A+A++      +    +++ LL TY+    P       +V++  L L    ++ E    +
Sbjct: 11  ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70

Query: 294 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 416
                L++ W D  + WN  ++G    L +   RLW+PDV++
Sbjct: 71  ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLM 112


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 33.1 bits (72), Expect = 0.004
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
 Frame = +3

Query: 177 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 335
           ++D++L  YD    P      D   VV + + +R  + I +      +Q   +  W+D+R
Sbjct: 35  VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94

Query: 336 LSWN--AGEWGCSTWLVSSERLWRPDVVLSKRGCXHRRGLRSP 458
           L +N   G     T L  + R+W PD+  S     H   +  P
Sbjct: 95  LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMP 136


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 32.7 bits (71), Expect = 0.005
 Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
 Frame = +3

Query: 165 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 329
           ++++++++LL  Y+ +  P     +  VV   + +R    + E +    +    + +W D
Sbjct: 36  NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95

Query: 330 KRLSWNAGEWGCSTWLVSSERLWRPD 407
            RLS+       S  +   ER+WRPD
Sbjct: 96  SRLSFLGPIKSLSLSIKMLERIWRPD 121


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 505 DISTPISIAVRQLGPTTC 558
           DIS+P ++    +GPTTC
Sbjct: 356 DISSPDAVEYGIIGPTTC 373


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 374 PSAAAPLPCVPTQS 333
           PSA AP+P +P  S
Sbjct: 411 PSAGAPMPPIPNMS 424



 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 772 PGHPXXGPXPVFXPGXPXXPXP 837
           P +P  GP P   PG P    P
Sbjct: 39  PPNPSQGPPPGGPPGAPPSQNP 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,558
Number of Sequences: 438
Number of extensions: 5608
Number of successful extensions: 61
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31806957
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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