Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_I17
(905 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.23
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.69
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 1.2
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 29 1.2
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 28 2.1
SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr 1... 27 2.8
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 3.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.7
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 27 4.8
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 26 8.5
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +3
Query: 537 PSPAISATSTRSSN---PRFHTPTTPDLTSIS-INPLTPYXKEFAPGLKP 674
P P+IS T+T SS H PTTPD ++ + L P +P KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.69
Identities = 25/113 (22%), Positives = 43/113 (38%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S ++N TP P+ +++ S P+
Sbjct: 1562 SSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT 1621
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + S P SS N P + N P S++
Sbjct: 1622 SSSVLNSSTPITSST-VLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTV 1673
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/113 (23%), Positives = 42/113 (37%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S ++N TP P+ +++ S P+
Sbjct: 1826 SSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT 1885
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + S P SS N S N P SS+
Sbjct: 1886 SSSVLNSSTPITSST-VLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSV 1937
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/113 (23%), Positives = 42/113 (37%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S ++N TP P+ +++ S P+
Sbjct: 2018 SSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPIT 2077
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + S P SS N S N P SS+
Sbjct: 2078 SSSVLNSSTPITSST-VLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSV 2129
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/113 (23%), Positives = 41/113 (36%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S ++N TP P+ ++ S P+
Sbjct: 890 SSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPIT 949
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + S P SS N S N P SS+
Sbjct: 950 SSSVLNSSTPITSST-VLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSV 1001
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/107 (24%), Positives = 40/107 (37%)
Frame = +3
Query: 558 TSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLVTGHG*X 737
TST ++ +TP +S +N TP A PP+ ++ S P+ +
Sbjct: 1616 TSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVN 1675
Query: 738 GFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
P+ SS + S P SS N S N P S++
Sbjct: 1676 TSTPITSST-VVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1721
Score = 27.9 bits (59), Expect = 2.1
Identities = 26/107 (24%), Positives = 40/107 (37%)
Frame = +3
Query: 558 TSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLVTGHG*X 737
TST+ ++P +TP +S +N TP P+ ++ S P+ +
Sbjct: 368 TSTQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILN 427
Query: 738 GFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
P+ SS + S P SS N S N P SS+
Sbjct: 428 SSTPITSST-VLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSV 473
Score = 27.9 bits (59), Expect = 2.1
Identities = 25/113 (22%), Positives = 42/113 (37%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S ++N TP P+ ++ S P+
Sbjct: 2282 SSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPIT 2341
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + + P SS N S S N P S++
Sbjct: 2342 SSSVLNSSTPITSST-VVNTSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2393
Score = 27.1 bits (57), Expect = 3.7
Identities = 26/113 (23%), Positives = 41/113 (36%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S +N TP A P+ ++ S P+
Sbjct: 1718 SSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1777
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + S P SS N S N P S++
Sbjct: 1778 SSTALNTSTPITSSS-VLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1829
Score = 26.6 bits (56), Expect = 4.8
Identities = 25/107 (23%), Positives = 39/107 (36%)
Frame = +3
Query: 558 TSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLVTGHG*X 737
TST ++ +TP +S +N TP P+ ++ S P+ +
Sbjct: 452 TSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALN 511
Query: 738 GFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
P+ SS + S P SS N S S N P S++
Sbjct: 512 TSTPITSSS-VLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 557
Score = 26.6 bits (56), Expect = 4.8
Identities = 25/113 (22%), Positives = 45/113 (39%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S +N TP P+ +++ S P+
Sbjct: 2894 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 2953
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS TS + SS ++ P ++ + N P SS+
Sbjct: 2954 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITS-STVVNTSTPITSSSV 3005
Score = 25.8 bits (54), Expect = 8.5
Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Frame = +3
Query: 528 IKPPSPAISATSTRSSNPRFHTP----TTPDLTSISINPLTPYXKEFAPGLKPPVVIRXS 695
+ +P S+T+ +S P + +TP +S +N TP P+
Sbjct: 1122 VNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTV 1181
Query: 696 ISVSHPLVTGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSS 875
++ S P+ + P+ SS + S P SS N S N P SS
Sbjct: 1182 VNTSTPITSSTVVNTSTPITSST-VVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSS 1240
Query: 876 I 878
I
Sbjct: 1241 I 1241
Score = 25.8 bits (54), Expect = 8.5
Identities = 26/113 (23%), Positives = 41/113 (36%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S +N TP P+ ++ S P+
Sbjct: 1214 SSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPIT 1273
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + S P SS N S S N P S++
Sbjct: 1274 SSTALNTSIPITSSS-VLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 1325
Score = 25.8 bits (54), Expect = 8.5
Identities = 26/113 (23%), Positives = 40/113 (35%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S +N TP P+ ++ S P+
Sbjct: 1442 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPIT 1501
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + S P SS N S N P SS+
Sbjct: 1502 SSTVVNTSTPITSST-VVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSV 1553
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/74 (21%), Positives = 30/74 (40%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S ++ TST ++ +TP +S +N TP P+ +++ S P+
Sbjct: 1994 SSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 2053
Query: 720 TGHG*XGFRPLISS 761
+ P+ SS
Sbjct: 2054 SSSVLNSSTPITSS 2067
Score = 25.8 bits (54), Expect = 8.5
Identities = 24/113 (21%), Positives = 41/113 (36%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S ++N TP P+ ++ S P+
Sbjct: 2690 SSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPIT 2749
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS + + P SS N S N P S++
Sbjct: 2750 SSSVLNSSTPITSST-VVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 2801
Score = 25.8 bits (54), Expect = 8.5
Identities = 25/113 (22%), Positives = 45/113 (39%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S +N TP P+ +++ S P+
Sbjct: 2798 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPIT 2857
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHNPVPSSNHPSXKNXXGPXKPSSI 878
+ P+ SS TS + SS ++ P ++ + N P SS+
Sbjct: 2858 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITS-STVVNTSTPITSSSV 2909
Score = 25.8 bits (54), Expect = 8.5
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPVVIRXSISVSHPLV 719
S + TST ++ +TP +S +N TP P+ +++ S P+
Sbjct: 2990 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPIT 3049
Query: 720 TGHG*XGFRPLISSE**ITSFAPY*SSFRHN---PVPSSN 830
+ P+ SS + S P SS N P+ SS+
Sbjct: 3050 SSTVLNSSTPITSSS-VLNSSTPITSSTALNTSTPITSSS 3088
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Frame = +2
Query: 278 TGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVT 457
T T S +T + +S+ Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 458 VEGVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 598
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Frame = +2
Query: 290 TKSNSVTVQSLPNVSSIIKG--YRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 463
T +N T S+P S+ + +V + S P P+T C T+ +
Sbjct: 423 TTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYT 482
Query: 464 GVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 598
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 483 STPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 531
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 1.2
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 278 TGTETKSNSVTV-QSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTA 448
TG +T+ QSL N+S S I R N A FPS S +P VDL
Sbjct: 308 TGVSLSRPRLTLDQSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQM 366
Query: 449 DVTVEGVNVLATPSSS 496
DV+ E L+TP S
Sbjct: 367 DVSDEEQRFLSTPLGS 382
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 531 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 644
+PPS A+ + + P P P + + NP TP+
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF 282
>SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 525 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILR 406
I A P +R AS+ TP+ T+A+ QQ GI+R
Sbjct: 9 IPAEPSAAVRSGNAAASS-TPNMKTAAIQQQIDDTVGIMR 47
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 260 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD-AYLVN 373
R+Y L T ++S + PN S + +GY + A+L+N
Sbjct: 2840 RVYLPLVPTIQANSSADSSNPPNTSFLFRGYHETAWLIN 2878
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 540 SPAISATSTRSSNPRFHTPTTPDLTSIS 623
S IS +ST N FH PT TS S
Sbjct: 801 SRTISTSSTNEYNTSFHAPTVSSTTSSS 828
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 341 IKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 430
+K RD YL NLEA FPS+ +KI +T+D
Sbjct: 378 LKTRRDQYLTNLEA--FPSSLFMKI-LTLD 404
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 510 PIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTAS 376
P ++E + TL +T+T V + + +L++ AEGK TAS
Sbjct: 507 PEEIKERIAIPKTLI-ATITLPDVSPNAKIELVLQIDAEGKLTAS 550
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,422,178
Number of Sequences: 5004
Number of extensions: 67442
Number of successful extensions: 345
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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