Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_I11
(952 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U96114-1|AAC51325.1| 870|Homo sapiens WWP2 protein. 32 3.5
BC064531-1|AAH64531.1| 870|Homo sapiens WWP2 protein protein. 32 3.5
BC013645-1|AAH13645.1| 870|Homo sapiens WW domain containing E3... 32 3.5
BC000108-1|AAH00108.1| 335|Homo sapiens WW domain containing E3... 32 3.5
U47129-1|AAC50767.1| 245|Homo sapiens parathyroid hormone recep... 31 8.1
U25128-1|AAC50157.1| 550|Homo sapiens PTH2 parathyroid hormone ... 31 8.1
BC036811-1|AAH36811.2| 550|Homo sapiens parathyroid hormone rec... 31 8.1
AY497546-1|AAR90849.1| 550|Homo sapiens parathyroid hormone rec... 31 8.1
AC019185-1|AAY15091.1| 223|Homo sapiens unknown protein. 31 8.1
>U96114-1|AAC51325.1| 870|Homo sapiens WWP2 protein.
Length = 870
Score = 31.9 bits (69), Expect = 3.5
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -1
Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 292 HGFGQCVEQRPLVP 251
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>BC064531-1|AAH64531.1| 870|Homo sapiens WWP2 protein protein.
Length = 870
Score = 31.9 bits (69), Expect = 3.5
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -1
Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 292 HGFGQCVEQRPLVP 251
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>BC013645-1|AAH13645.1| 870|Homo sapiens WW domain containing E3
ubiquitin protein ligase 2 protein.
Length = 870
Score = 31.9 bits (69), Expect = 3.5
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -1
Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 292 HGFGQCVEQRPLVP 251
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>BC000108-1|AAH00108.1| 335|Homo sapiens WW domain containing E3
ubiquitin protein ligase 2 protein.
Length = 335
Score = 31.9 bits (69), Expect = 3.5
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -1
Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
+S+ P+ +T P PA A G G Q+LP AA PD A R+
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320
Query: 292 HGFGQCVEQRPLVP 251
H +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334
>U47129-1|AAC50767.1| 245|Homo sapiens parathyroid hormone receptor
protein.
Length = 245
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 798 HSPKAHFRXLSPHSLFMIIISHTHL*RFTCFKNSXTXLN*T*MMHC 935
H + +R L+ +L ++++ H F C +S T L MHC
Sbjct: 47 HDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHC 92
>U25128-1|AAC50157.1| 550|Homo sapiens PTH2 parathyroid hormone
receptor protein.
Length = 550
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 798 HSPKAHFRXLSPHSLFMIIISHTHL*RFTCFKNSXTXLN*T*MMHC 935
H + +R L+ +L ++++ H F C +S T L MHC
Sbjct: 352 HDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHC 397
>BC036811-1|AAH36811.2| 550|Homo sapiens parathyroid hormone
receptor 2 protein.
Length = 550
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 798 HSPKAHFRXLSPHSLFMIIISHTHL*RFTCFKNSXTXLN*T*MMHC 935
H + +R L+ +L ++++ H F C +S T L MHC
Sbjct: 352 HDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHC 397
>AY497546-1|AAR90849.1| 550|Homo sapiens parathyroid hormone
receptor 2 precursor protein.
Length = 550
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 798 HSPKAHFRXLSPHSLFMIIISHTHL*RFTCFKNSXTXLN*T*MMHC 935
H + +R L+ +L ++++ H F C +S T L MHC
Sbjct: 352 HDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHC 397
>AC019185-1|AAY15091.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 798 HSPKAHFRXLSPHSLFMIIISHTHL*RFTCFKNSXTXLN*T*MMHC 935
H + +R L+ +L ++++ H F C +S T L MHC
Sbjct: 25 HDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHC 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,055,128
Number of Sequences: 237096
Number of extensions: 2704676
Number of successful extensions: 5033
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5033
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -