Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_I07
(854 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0884 + 20543084-20543638 33 0.22
07_03_0600 + 19866757-19867218,19867920-19868429 33 0.38
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 32 0.51
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 32 0.67
04_04_0146 + 23106325-23108154 31 1.2
01_06_1377 + 36764461-36765339 31 1.2
11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,234... 31 1.5
07_01_0568 - 4216898-4216911,4216997-4217024,4217265-4217335,421... 31 1.5
03_05_1045 - 29914581-29914829,29914840-29916083,29919055-299191... 31 1.5
03_02_0045 - 5251234-5251305,5251362-5251419,5252256-5252539,525... 31 1.5
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 30 2.0
09_04_0379 - 17094540-17094868,17095354-17095717 30 2.7
08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766 30 2.7
02_05_0224 + 26948263-26948520,26948831-26948907,26949597-269496... 30 2.7
02_01_0189 - 1273313-1274157,1274595-1275549 30 2.7
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 29 3.6
11_06_0610 - 25449085-25453284 29 4.7
07_03_0565 - 19561078-19561425,19562253-19563746 29 4.7
06_01_0456 - 3249662-3249710,3249838-3250451,3250694-3250780,325... 29 4.7
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 29 4.7
10_08_0062 + 14586613-14586966 29 6.2
09_04_0506 - 18188785-18190599 29 6.2
08_02_1420 + 26942777-26942905,26944415-26944511,26944596-269449... 29 6.2
07_01_0217 + 1620625-1621419,1621982-1622152,1622581-1622865,162... 29 6.2
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 29 6.2
03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047 29 6.2
11_06_0354 - 22605903-22606145,22606239-22606442,22607227-226074... 28 8.3
09_04_0581 - 18684273-18685814,18686156-18686200,18686393-18686683 28 8.3
08_02_0178 - 13853847-13854416 28 8.3
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 28 8.3
03_06_0702 + 35626836-35627712,35627820-35627992,35629318-35629584 28 8.3
03_03_0048 + 14065317-14065433,14065646-14065726,14066566-140669... 28 8.3
>04_03_0884 + 20543084-20543638
Length = 184
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -1
Query: 182 GPPRVEPPRSNYTFAGAPFPPRAEVAT---PPVIGSERLRLQVPGWRPGEQ 39
GP + PPRS + A AP PP+ ++A S+R + + GW PGE+
Sbjct: 10 GPMAMAPPRSGHATAAAPPPPQHKMAMMMHMTFFWSDRAVVLIRGW-PGER 59
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = -1
Query: 353 LKEVPAKTPMAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRL-QHGP 177
+++ P T G H P + S A P + + + +Q P Q GP
Sbjct: 1 MQQPPPPTMNGGHHAAPPPPQVSG--APPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGP 58
Query: 176 PRVEPPRSNYTFAGAPFPPRAEVATPP 96
P PP+ G P PP + A PP
Sbjct: 59 PHAPPPQQPPAMWGQPPPPPPQYAPPP 85
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 227 AGRRVRQAARPRLQHGPP-RVEPPRSNYTFAGAPFPPRAEVA 105
AG+ R RP+ QH PP R PPR ++ + P A V+
Sbjct: 83 AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPAKAAAAVS 124
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 451 TSNAPPSSRSLERNSRCRASWLRCSAATRPGRR 549
+S APPS+ +L R R A+ +RCS A PG R
Sbjct: 13 SSAAPPSAAALRRPRRRCATPVRCSLAAAPGLR 45
>04_04_0146 + 23106325-23108154
Length = 609
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 221 RRVRQAARPRLQHG-PPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 60
R +R RPR P + PP +A P PP+A A P ++ + + L +P
Sbjct: 3 RALRLRHRPRRPPPVPAQAPPPSPRPWYAAPPPPPQAAAADPLLVAASEVALALP 57
>01_06_1377 + 36764461-36765339
Length = 292
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 302 PEGEASAVAAHPVREDRTDRLDGTEAGR-RVRQAARPRLQHGPPRVEPPRSNYTFAGAPF 126
P+ ASA+ P+ R G G+ R+R A R R P PP S+ + P
Sbjct: 121 PDSPASALITLPLL-----RPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPP 175
Query: 125 PPRAEVA-TPPVIGSER 78
PP A A PP GSE+
Sbjct: 176 PPPAYSAPPPPQYGSEQ 192
>11_01_0315 -
2347254-2347345,2347485-2347895,2348182-2349633,
2349688-2350045,2350818-2351177,2351321-2351419,
2351856-2351948,2352078-2352215,2352389-2352476,
2352682-2352770,2353113-2353178,2353370-2353481,
2354702-2354901
Length = 1185
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Frame = -1
Query: 359 GYLKEVPAKTPMAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQA--ARPRLQ 186
G +K+ P + M + + A AV HP + R G + + R R++
Sbjct: 399 GCVKDYPMQLRMQALEMIETVVAAVAVFPHPPSQ-RAAAAAGASRVPAIASSPRGRRRIE 457
Query: 185 HGPPRVEPPR--SNYTFAGAPFPPRAEVATPPV 93
R+EPPR S+ F +P PP +PP+
Sbjct: 458 GSGRRIEPPRPPSHRGFRPSPPPPGVAYNSPPL 490
>07_01_0568 -
4216898-4216911,4216997-4217024,4217265-4217335,
4218026-4218140,4218245-4218314,4218552-4218646,
4219320-4219379,4219476-4219547,4219676-4219819
Length = 222
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 170 VEPPRSNYTFAGAPFPPRAEVATPP 96
+ PP + TFAGAP PP E PP
Sbjct: 2 ITPPVAGDTFAGAPPPPSQEEDAPP 26
>03_05_1045 -
29914581-29914829,29914840-29916083,29919055-29919199,
29919727-29919792,29919882-29920108,29920204-29920310,
29920428-29920502,29920600-29920688,29920768-29920848,
29921631-29921702,29922056-29922178
Length = 825
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 419 GTHAGALLWIRRATRRPRRGHWRGTLAAARRGYDARQRRVLEGDARLLRV 568
G G R+A RRPRRG A R DAR+ R L G + +V
Sbjct: 723 GAGGGGRRRARQARRRPRRGRLSNIYLDANRKDDARRVRKLIGSRGIRKV 772
>03_02_0045 -
5251234-5251305,5251362-5251419,5252256-5252539,
5252836-5253019,5253564-5253814,5253921-5254024,
5254143-5254281
Length = 363
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 200 RPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGS 84
R RL+ G R+ P R + + A P PP ATPP G+
Sbjct: 10 RRRLRGGGHRLLPSRPSTSAASQPPPPPPSAATPPPPGA 48
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 209 QAARPRLQHGP--PRVEPPRSNYTFAGAPFPPRAEVATPP 96
Q P L H P P + P A AP PPRA TPP
Sbjct: 161 QDPAPSLPHAPAPPPPQAPAPTPPQAPAPTPPRAPTPTPP 200
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 316 NICVSRKVRHPRSRPTQSARTGRTASTVRRPADG 215
N + R++RH +PT AR G + +PA G
Sbjct: 176 NRAIPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209
>08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766
Length = 310
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 212 RQAARPRLQHGP-PRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGW-RPG 45
RQA R L P P +P S+ +GA PP ++ AT +E + + GW RPG
Sbjct: 160 RQALRDALSLDPSPPAKPLDSS---SGATAPPSSQAATSYASSAENIARLLEGWMRPG 214
>02_05_0224 +
26948263-26948520,26948831-26948907,26949597-26949658,
26949797-26949915,26950326-26950493,26950587-26950619
Length = 238
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -1
Query: 218 RVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVI 90
R A P PPR P GAP PPR A P++
Sbjct: 16 RTAAALSPFSSSAPPRHSPRILRAIPVGAPHPPRVSAAVSPLV 58
>02_01_0189 - 1273313-1274157,1274595-1275549
Length = 599
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/64 (34%), Positives = 23/64 (35%)
Frame = +3
Query: 357 AGREPTAQCHHCADRDEEDTAEHTLARCSGFDEQRAALVAVIGEELSLPRVVATMLGSDA 536
AG P A HCA T + A RAA A E L RVVA S
Sbjct: 28 AGASPPADPVHCASGTARCTVTNAYAAFPDRSTCRAAAAAYPASEEELLRVVAAAAASGT 87
Query: 537 SWKA 548
KA
Sbjct: 88 KMKA 91
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 460 APPSSRSLERNSRCRASWLRCSAATRPGR-RC 552
+PP+ +L R RCR LRC A R R RC
Sbjct: 65 SPPTGAALYRARRCRRKLLRCRARHRRHRDRC 96
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 5/95 (5%)
Frame = -1
Query: 365 PSGYLKEVPAKTPMAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQ 186
P G++ P TP + PE EAS+ P E T + P
Sbjct: 699 PEGHMPSPPKSTPPVEKSPPTPESEASS-PPPPAPEGHTPSPPKSSPPEEKSPPIPPTSH 757
Query: 185 HGPPRVE-----PPRSNYTFAGAPFPPRAEVATPP 96
PP E PP+S+ +P PP + +PP
Sbjct: 758 TSPPTPEEYTPSPPKSSPPEEKSP-PPHSPEKSPP 791
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 22 PSRRRACSPGRHPGTWRRRR-SLPITGGVATSALGGKGAPAKV*FERGGSTLGGPCWR 192
P RR +P H T +RRR S+ + + A G+G F R +T GG W+
Sbjct: 385 PGRRSVAAPPSHMATPQRRRNSVDVPRRLPACASVGRGEGGV--FGRHATTTGGARWK 440
>06_01_0456 - 3249662-3249710,3249838-3250451,3250694-3250780,
3251509-3252384,3252445-3252534,3252645-3252696,
3253117-3253168,3253265-3253363,3253444-3253528,
3253620-3253668,3253749-3253816,3254417-3254482,
3255690-3255741,3256685-3256767,3256915-3256946,
3257271-3257466,3258542-3258607,3259797-3259869,
3260010-3260224
Length = 967
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -1
Query: 218 RVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP---GWRP 48
R + RP + PPR + P F A P +TPP IG+ ++P WRP
Sbjct: 854 RPQAVPRPTISQAPPRAQSP-----FLPATARP---PSTPPPIGTSDDLQELPVDESWRP 905
Query: 47 -GEQARRLEGETF 12
G+ L GE +
Sbjct: 906 TGQMRGSLTGEAY 918
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 29.1 bits (62), Expect = 4.7
Identities = 30/100 (30%), Positives = 46/100 (46%)
Frame = -1
Query: 326 MAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQHGPPRVEPPRSNY 147
+AG H GEA+A AA + D DG EA +R RP+L+ PP
Sbjct: 156 LAGAH-DDVGGEAAASAAKQEAKGNGDG-DG-EAAPLLR---RPQLRSDYSTHRPPPGGR 209
Query: 146 TFAGAPFPPRAEVATPPVIGSERLRLQVPGWRPGEQARRL 27
+ + P +AE +P + G +R P WR ++ R++
Sbjct: 210 SRGRSRHPRKAESTSPSISGGDRGSRSGP-WRQLKRWRKV 248
>10_08_0062 + 14586613-14586966
Length = 117
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +1
Query: 43 SPGRHPGTWRRRRSLPITGGVATSALGGKGAPAKV*FER--GGSTLGGPCWRRG 198
S G G W RRR GG GG GA A+ + GG+ GG C G
Sbjct: 10 SGGGLAGEWSRRRRRG-AGGAGAGCGGGDGAEAEAEADAGGGGAAEGGGCASAG 62
>09_04_0506 - 18188785-18190599
Length = 604
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/76 (27%), Positives = 28/76 (36%)
Frame = -1
Query: 347 EVPAKTPMAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQHGPPRV 168
+ P P Q +Q + S P R+ + G A RP H PP+
Sbjct: 75 QAPPPPPQQQQQQQQLQAPPSLPPPPPQRQPEKVHIPGVAAVPPAPVPDRPNPVHLPPQP 134
Query: 167 EPPRSNYTFAGAPFPP 120
+PP A AP PP
Sbjct: 135 QPP-----VAAAPPPP 145
>08_02_1420 +
26942777-26942905,26944415-26944511,26944596-26944962,
26945286-26945793
Length = 366
Score = 28.7 bits (61), Expect = 6.2
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Frame = +3
Query: 339 RYLFKIAGREPTAQCHH-CADRDEEDTAEHTLARCSGFDEQRAALVAVIGEELSLPRVV- 512
R FKI+ E CH C + + E T+ HT+ D AA +++ L+L +
Sbjct: 50 RVYFKISSSE--FSCHFICREGEAEQTSYHTVG-----DHSNAASSSLVCPYLALRGFLH 102
Query: 513 -ATMLGSDASWKAMLDFCESTISXKEAAXRKKENSSLFRTDPSPSNRG--------PXAG 665
+ S +S F S + A N+ +F S ++ P +G
Sbjct: 103 PVHVPSSSSSGAENSSFHRHPTSLEGHAAHDLSNTQVFHATESRNHDNDHRYMSNLPVSG 162
Query: 666 IXPYXPAPVGGGLPR 710
I + AP G GLPR
Sbjct: 163 IPDHSVAPFGIGLPR 177
>07_01_0217 +
1620625-1621419,1621982-1622152,1622581-1622865,
1623113-1623262
Length = 466
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 314 HLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQ 186
HLR P G A A A + + R+DG E GR V PRL+
Sbjct: 106 HLRPPPGGAFAALATATIQ--SCRVDGGELGRLVSSPQCPRLE 146
>04_03_1049 +
22015053-22015083,22015770-22015885,22016013-22016108,
22016229-22016285,22016468-22016620,22016754-22016838,
22017097-22017187,22017324-22017488,22017813-22017932,
22018020-22018104,22018234-22018402,22019055-22019173,
22019250-22019440,22019746-22019957,22020905-22021500,
22022538-22022658,22023439-22023868,22024412-22024797,
22024976-22025071,22025380-22025432,22026915-22027061,
22027139-22027309,22027880-22027962,22028049-22028247,
22028668-22028789,22029752-22029818,22029960-22030010,
22030768-22031001,22031263-22031451,22032455-22032646,
22032742-22032936
Length = 1673
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 449 RRATRRPRRGHWRGTLAAARRGYDARQRR 535
RR + RR WR A RRG A QRR
Sbjct: 590 RRGGKERRRPSWRALAANRRRGEAANQRR 618
>03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047
Length = 368
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 404 RGRHSGTHAGALLWIRRATRRPRRGHWRGTLAAAR-RGYDARQRRVLEGDA 553
RG H G G R A RRPRR T+AAAR R A + G+A
Sbjct: 244 RGAHGGGGGGGR-GARAARRRPRREDLAVTVAAARGRASTAASLACVHGEA 293
>11_06_0354 -
22605903-22606145,22606239-22606442,22607227-22607490,
22607945-22608142,22608238-22608498,22608977-22609183,
22610004-22610207,22610455-22610520,22610717-22610949,
22610982-22611051,22611109-22611136,22611243-22611367,
22611950-22612051
Length = 734
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 430 WRVALDSTSNAPPSSRSLERNSRCRASWLRCSAATRPGR 546
WR +++TSN + +R RC LRC R R
Sbjct: 213 WRDRMEATSNYASTEEDCQRLKRCIEIALRCVEVERKNR 251
>09_04_0581 - 18684273-18685814,18686156-18686200,18686393-18686683
Length = 625
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 433 RVALDSTSNAPPSSRSLERNS 495
R+A STSNA PSS S+ R S
Sbjct: 357 RLATSSTSNAQPSSSSMSRRS 377
>08_02_0178 - 13853847-13854416
Length = 189
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -1
Query: 230 EAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 60
+A RR + P LQ+ V PP + PFPP+A A G + QVP
Sbjct: 124 KAARRTKATTAPILQYSVGYV-PPHVHPQVMTRPFPPQAAQAPVYFAGQHQPPGQVP 179
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 231 RTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGREPTA 377
+ VE + LADWV + G T TG C+G L + ++P+A
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSA 238
>03_06_0702 + 35626836-35627712,35627820-35627992,35629318-35629584
Length = 438
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/92 (22%), Positives = 39/92 (42%)
Frame = +3
Query: 399 RDEEDTAEHTLARCSGFDEQRAALVAVIGEELSLPRVVATMLGSDASWKAMLDFCESTIS 578
+D++ +H L DE++ AL+ ++ + + P+ +T S A AML E +++
Sbjct: 337 KDQDSQEQHHLPGSKENDEEKLALLRLLSKYVEDPKQCSTENFSIADRIAML---EQSLA 393
Query: 579 XKEAAXRKKENSSLFRTDPSPSNRGPXAGIXP 674
A + + D RGP P
Sbjct: 394 KPHQAFTGTKRKRTAQEDSVECTRGPKCSYTP 425
>03_03_0048 +
14065317-14065433,14065646-14065726,14066566-14066967,
14067131-14067199,14067278-14067360,14067503-14067555,
14067659-14067780,14068033-14068386,14068479-14068578,
14068663-14068895
Length = 537
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Frame = +1
Query: 460 APPSSRSLERNSRC-----RASWLRCSAAT--RPGRRCSTSASPP 573
+PP R R C RA+ L C+A T RP R +T+A PP
Sbjct: 151 SPPRRRRRGRTGGCSSPTPRAASLACAAPTAPRPSSRTTTTAPPP 195
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,394,954
Number of Sequences: 37544
Number of extensions: 513800
Number of successful extensions: 2934
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2911
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -