Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_I07
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 31 0.79
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 29 5.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.6
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 5.6
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 7.4
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical pr... 28 9.7
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 28 9.7
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 28 9.7
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 9.7
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 9.7
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 9.7
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 9.7
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -1
Query: 236 GTEAGRR----VRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPP 96
GTE+G R RQA + H PP V PP+ A P P + VA PP
Sbjct: 255 GTESGARHGSISRQATLTFVSHKPPPVNPPQP----AVPPKPAKISVADPP 301
>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
protein C27B7.7 protein.
Length = 1471
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 117 SRGEGRPSEGVVRARRLHSRRSVLEAWSRRLADPSAGL 230
+RG+ RPS V + R ++ + ++ WSR A SAG+
Sbjct: 469 ARGKPRPSISVAISDRKNASQVEVDVWSRLQATSSAGI 506
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 350 KEVPAKTPMAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQHG 180
++ P+ + ++LR+P + + ++ P+ + +RLD TE R L+HG
Sbjct: 32 QQTPSSSSSKRKNLRKPSTDDTPSSSEPL--SKKNRLDSTETAEEDNTRRRRTLKHG 86
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 197 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 48
P + GPP PP G P PP PP+ G PG P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 197 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 48
P + GPP PP G P PP PP+ G PG P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 197 PRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRP 48
P + GPP PP G P PP PP+ G PG P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = -1
Query: 365 PSGYLKEVPAK-----TPMAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAA 201
P LK P K P AG ++ + A++V V+E+ D+ + T G RQ
Sbjct: 1204 PDSALKPAPTKRKASEAPSAGVATKKGKAMAASVDEIQVKEEEEDQKEET-VGSVERQE- 1261
Query: 200 RPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPP 96
PP+ +P ++ A AP PP + PP
Sbjct: 1262 -------PPK-KPVADDHKSAIAPLPPANTIMPPP 1288
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 723 PXTFTGGAPHLQGPGXTGVFPXPAPG 646
P +F GAP GPG G F APG
Sbjct: 295 PGSFPPGAPGPGGPGMPGSFAPGAPG 320
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -1
Query: 563 AEVEHRLPGRVAAEHRSHDARQREFLSNDRDEGGALLVESRAT 435
A+V+++ + + SH R+F++N +++ G+ L++ R T
Sbjct: 754 ADVKYKDGWKPGMDSESHGFISRQFIANSKEKAGSNLLDKRRT 796
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.7
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = -1
Query: 365 PSGYLKEVPAKTPMAGQHLRQPEGEASAVAAHPVREDRTDRLDGTEAGRRVRQAARPRLQ 186
P+ + P+K+P A + R P G S R R R A R RQ+ P+ +
Sbjct: 449 PAPRRRRSPSKSPQAPRRRRSPSGSKS-------RSPRRRR--SPAAAPRRRQS--PQRR 497
Query: 185 HGPPRVEPPRSNYTFAGAPFPPR 117
P R P S+ P PPR
Sbjct: 498 RSPRRRRSPSSSSRSRSPPPPPR 520
>Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical
protein C33A12.6 protein.
Length = 520
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 628 VRKREEFSFFRSAASXCDMVDSQKSSIAFQDASLPSIVATTRGSESSSPM 479
+RK F F S A DM D K+S+A S+P + +S P+
Sbjct: 282 IRKNNVFISFGSNAKSVDMPDEFKNSLADVFKSMPDTTFIWKYENTSDPI 331
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 212 RQAARPRLQ--HGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRL 69
++ +RP L+ G R PR+N T AGAP A+ P I R L
Sbjct: 13 QKPSRPFLRKGQGTARFRMPRNNKTSAGAPPTSELSSASSPSINVPRFSL 62
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 212 RQAARPRLQ--HGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRL 69
++ +RP L+ G R PR+N T AGAP A+ P I R L
Sbjct: 13 QKPSRPFLRKGQGTARFRMPRNNKTSAGAPPTSELSSASSPSINVPRFSL 62
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 304 SRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRREWS-LRARTTP 143
+R+ R RSR ++ R GR+ S S RRD SS RR+ S R+R+ P
Sbjct: 27 AREARRSRSR-SRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPP 80
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 304 SRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRREWS-LRARTTP 143
+R+ R RSR ++ R GR+ S S RRD SS RR+ S R+R+ P
Sbjct: 55 AREARRSRSR-SRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPP 108
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 304 SRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRREWS-LRARTTP 143
+R+ R RSR ++ R GR+ S S RRD SS RR+ S R+R+ P
Sbjct: 113 AREARRSRSR-SRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPP 166
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 304 SRKVRHPRSRPTQSARTGRTASTVRRPADGSAKRRDHASSTDRREWS-LRARTTP 143
+R+ R RSR ++ R GR+ S S RRD SS RR+ S R+R+ P
Sbjct: 114 AREARRSRSR-SRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPP 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,125,192
Number of Sequences: 27780
Number of extensions: 323117
Number of successful extensions: 1361
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -