Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_I05
(946 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 36 4e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 36 4e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.003
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 33 0.004
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.005
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.005
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 33 0.005
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 32 0.009
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.011
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.011
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.015
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.020
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 31 0.020
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.027
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.061
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.061
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.061
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.14
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.0
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 7.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 9.3
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
V S+ +WRPD+VL NA A +A + + G V W + + P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYF-PFD 163
Query: 507 XQTCTXQF 530
QTC +F
Sbjct: 164 EQTCVLKF 171
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 306 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 479
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 480 QFRQLGPXDXQTCTXQF 530
R P D QTC +F
Sbjct: 148 DVRYF-PFDQQTCFMKF 163
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
V S+ +WRPD+VL NA A +A ++ G V W + + P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYF-PFD 159
Query: 507 XQTCTXQF 530
QTC +F
Sbjct: 160 EQTCVMKF 167
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYF-PFD 161
Query: 507 XQTCTXQF 530
QTC +F
Sbjct: 162 QQTCIMKF 169
Score = 22.6 bits (46), Expect = 5.3
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 179 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGXMG 313
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.002
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQFRQLGPXDX 509
ER+WRPD N + + R+S +G + + RL I M+ R P D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNF-PMDR 173
Query: 510 QTC 518
Q+C
Sbjct: 174 QSC 176
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 101 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 265
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 266 MNWIDKRLSWNA 301
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 33.1 bits (72), Expect = 0.004
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
+ RLW+PDV++ N+A G Y V NNG+ ++ + + P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWF-PFD 158
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 159 DQRCEMKF 166
Score = 23.4 bits (48), Expect = 3.0
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +2
Query: 62 RFLLTCAIASAAE--CENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-N 220
R+ L AIA AA + +++ LL TY+ E P ++ +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 221 IRESESTVRILADLQMNWIDKRLSWNAGXMG 313
+ E + L++ W D + WN G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.005
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 107 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 274
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 275 IDKRLSWNAG 304
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 32.7 bits (71), Expect = 0.005
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQFRQLG 497
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ +
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDV-EFF 160
Query: 498 PXDXQTC 518
P D QTC
Sbjct: 161 PYDVQTC 167
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 32.7 bits (71), Expect = 0.005
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 312 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 479
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 480 QFRQLGPXDXQTCTXQF 530
P D Q+C +F
Sbjct: 161 NVEYF-PFDEQSCIMKF 176
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 31.9 bits (69), Expect = 0.009
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 312 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 479
G T V SE +W PD+VL N A G+Y + +A + + G V W K I
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW-KPPAIYKSFCE 146
Query: 480 QFRQLGPXDXQTCTXQF 530
+ P D QTC +F
Sbjct: 147 IDVEYFPFDEQTCFMKF 163
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.011
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V++NGS ++ + + P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWF-PFD 189
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 190 DQHCDMKF 197
Score = 25.0 bits (52), Expect = 1.00
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +2
Query: 128 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 292
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 293 WNAGXMG 313
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.011
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V++NGS ++ + + P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWF-PFD 189
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 190 DQHCDMKF 197
Score = 25.0 bits (52), Expect = 1.00
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +2
Query: 128 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 292
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 293 WNAGXMG 313
WN G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.015
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V++NGS ++ + + P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWF-PFD 121
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 122 DQHCDMKF 129
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.020
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V+++GS ++ + M P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWF-PFD 121
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 122 DQHCDMKF 129
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.020
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKR--LDISTPISMQFRQLG 497
V R+WRPD +L N A + VS+ G V W+ S I ++F
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEF---F 138
Query: 498 PXDXQTCTXQF 530
P D Q C ++
Sbjct: 139 PFDEQRCVLKW 149
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.027
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V+++GS ++ + M P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWF-PFD 121
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 122 DQHCDMKF 129
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.061
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V+++GS ++ + + P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWF-PFD 121
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 122 DQHCDMKF 129
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.061
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V+++GS ++ + + P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWF-PFD 121
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 122 DQHCDMKF 129
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.061
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 330 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQFRQLGPXD 506
++ +LW+PD+++ N+A G Y V+++GS ++ + + P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWF-PFD 121
Query: 507 XQTCTXQF 530
Q C +F
Sbjct: 122 DQHCDMKF 129
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 218 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 313
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.14
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQFRQLGPX 503
+ LW+PD LNA + AL + S+ N +V + R+ M+F QL P
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEF-QLYPM 125
Query: 504 DXQTC 518
D Q C
Sbjct: 126 DIQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.3
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQFRQLGPXDX 509
+ +WRPD NA + T + + + ++ ++ +L + +M F + P D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNF-LIYPHDT 174
Query: 510 QTCTXQ 527
Q C Q
Sbjct: 175 QECKLQ 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 3.0
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 107 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 274
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 275 IDKRLSW 295
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 7.0
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 107 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 274
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 275 IDKRLSW 295
D RL++
Sbjct: 68 TDPRLAF 74
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.3
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -1
Query: 811 PXGXPXGPXPGGXPPPTXXPPXHXLXPGA 725
P P P G P P+ PP PGA
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGG-PPGA 54
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 9.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 124 GQ*CCVFAFCRTSYSTSEEKPVTR 53
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,892
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 41
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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