Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_I04
(870 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 393 e-109
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 393 e-109
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 393 e-109
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 382 e-106
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 382 e-106
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 225 8e-59
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 393 bits (968), Expect = e-109
Identities = 178/255 (69%), Positives = 204/255 (80%)
Frame = +3
Query: 48 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 407
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 77 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 136
Query: 408 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIMEIQL 587
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQR KKAH+MEIQL
Sbjct: 137 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 196
Query: 588 NGGTIEDXVKWARXHLGETYPWSILCLXXMK*LTALVSPRAKDTKGVTSRWHTKKLPRKT 767
NGG+IED VKWAR HL + S + + + + + K KGVTSRWHTKKLPRKT
Sbjct: 197 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 255
Query: 768 HKGLRKVACIGAWHP 812
HKGLRKVACIGAWHP
Sbjct: 256 HKGLRKVACIGAWHP 270
Score = 49.6 bits (113), Expect = 6e-06
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 653 VDSVFXXDEMIDCIGVTKGKGYQRCHFSLAHKETTP*DT-QGS*ESCLHWSLASSXGVVT 829
V +VF DEMIDC+GVTKGKG++ S H + P T +G + + S T
Sbjct: 218 VSNVFGQDEMIDCVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTT 276
Query: 830 VXRAGXKGYXXRT 868
V RAG KGY RT
Sbjct: 277 VARAGQKGYHHRT 289
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 393 bits (968), Expect = e-109
Identities = 178/255 (69%), Positives = 204/255 (80%)
Frame = +3
Query: 48 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 407
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIMEIQL 587
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQR KKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 588 NGGTIEDXVKWARXHLGETYPWSILCLXXMK*LTALVSPRAKDTKGVTSRWHTKKLPRKT 767
NGG+IED VKWAR HL + S + + + + + K KGVTSRWHTKKLPRKT
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 244
Query: 768 HKGLRKVACIGAWHP 812
HKGLRKVACIGAWHP
Sbjct: 245 HKGLRKVACIGAWHP 259
Score = 49.6 bits (113), Expect = 6e-06
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 653 VDSVFXXDEMIDCIGVTKGKGYQRCHFSLAHKETTP*DT-QGS*ESCLHWSLASSXGVVT 829
V +VF DEMIDC+GVTKGKG++ S H + P T +G + + S T
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTT 265
Query: 830 VXRAGXKGYXXRT 868
V RAG KGY RT
Sbjct: 266 VARAGQKGYHHRT 278
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 393 bits (968), Expect = e-109
Identities = 178/255 (69%), Positives = 204/255 (80%)
Frame = +3
Query: 48 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 407
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 408 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIMEIQL 587
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQR KKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 588 NGGTIEDXVKWARXHLGETYPWSILCLXXMK*LTALVSPRAKDTKGVTSRWHTKKLPRKT 767
NGG+IED VKWAR HL + S + + + + + K KGVTSRWHTKKLPRKT
Sbjct: 186 NGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKT 244
Query: 768 HKGLRKVACIGAWHP 812
HKGLRKVACIGAWHP
Sbjct: 245 HKGLRKVACIGAWHP 259
Score = 49.6 bits (113), Expect = 6e-06
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 653 VDSVFXXDEMIDCIGVTKGKGYQRCHFSLAHKETTP*DT-QGS*ESCLHWSLASSXGVVT 829
V +VF DEMIDC+GVTKGKG++ S H + P T +G + + S T
Sbjct: 207 VSNVFGQDEMIDCVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTT 265
Query: 830 VXRAGXKGYXXRT 868
V RAG KGY RT
Sbjct: 266 VARAGQKGYHHRT 278
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 382 bits (940), Expect = e-106
Identities = 173/247 (70%), Positives = 199/247 (80%)
Frame = +3
Query: 72 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 251
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 252 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 431
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 432 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIMEIQLNGGTIEDX 611
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQR KKAH+MEIQLNGG+IED
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 612 VKWARXHLGETYPWSILCLXXMK*LTALVSPRAKDTKGVTSRWHTKKLPRKTHKGLRKVA 791
VKWAR HL + S + + + + + K KGVTSRWHTKKLPRKTHKGLRKVA
Sbjct: 181 VKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 792 CIGAWHP 812
CIGAWHP
Sbjct: 240 CIGAWHP 246
Score = 49.6 bits (113), Expect = 6e-06
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 653 VDSVFXXDEMIDCIGVTKGKGYQRCHFSLAHKETTP*DT-QGS*ESCLHWSLASSXGVVT 829
V +VF DEMIDC+GVTKGKG++ S H + P T +G + + S T
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTT 252
Query: 830 VXRAGXKGYXXRT 868
V RAG KGY RT
Sbjct: 253 VARAGQKGYHHRT 265
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 382 bits (940), Expect = e-106
Identities = 173/247 (70%), Positives = 199/247 (80%)
Frame = +3
Query: 72 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 251
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 252 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 431
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 432 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRXKKAHIMEIQLNGGTIEDX 611
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQR KKAH+MEIQLNGG+IED
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 612 VKWARXHLGETYPWSILCLXXMK*LTALVSPRAKDTKGVTSRWHTKKLPRKTHKGLRKVA 791
VKWAR HL + S + + + + + K KGVTSRWHTKKLPRKTHKGLRKVA
Sbjct: 181 VKWAREHLEKPIQVSNV-FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 792 CIGAWHP 812
CIGAWHP
Sbjct: 240 CIGAWHP 246
Score = 49.6 bits (113), Expect = 6e-06
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 653 VDSVFXXDEMIDCIGVTKGKGYQRCHFSLAHKETTP*DT-QGS*ESCLHWSLASSXGVVT 829
V +VF DEMIDC+GVTKGKG++ S H + P T +G + + S T
Sbjct: 194 VSNVFGQDEMIDCVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTT 252
Query: 830 VXRAGXKGYXXRT 868
V RAG KGY RT
Sbjct: 253 VARAGQKGYHHRT 265
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 225 bits (549), Expect = 8e-59
Identities = 97/118 (82%), Positives = 106/118 (89%)
Frame = +3
Query: 48 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 227
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 228 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 401
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +3
Query: 72 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 251
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 252 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 395
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,383,971
Number of Sequences: 53049
Number of extensions: 849580
Number of successful extensions: 1804
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -