Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_H07
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051811-1|AAK93235.1| 662|Drosophila melanogaster LD32109p pro... 31 1.6
AF262375-1|AAF72066.1| 662|Drosophila melanogaster RNA polymera... 31 1.6
AF262374-1|AAF72065.1| 662|Drosophila melanogaster RNA polymera... 31 1.6
AE014297-2339|AAF55409.2| 662|Drosophila melanogaster CG31256-P... 31 1.6
AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p pro... 29 6.4
AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-P... 29 6.4
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P... 29 6.4
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 8.5
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 8.5
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 8.5
>AY051811-1|AAK93235.1| 662|Drosophila melanogaster LD32109p
protein.
Length = 662
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 774 KCPNCGSSRTEQYYYRNDKPSVG*XNLFHDGLIPAHVPF*WVNN--PTLGEFCFA 616
KC NCGS+ E+ R D+ + ++ D LI + V F V + +G+F A
Sbjct: 6 KCRNCGSNEIEEDNARGDRVCMNCGSVLEDSLIVSEVQFEEVGHGAAAIGQFVSA 60
>AF262375-1|AAF72066.1| 662|Drosophila melanogaster RNA polymerase
III transcriptionfactor BRF protein.
Length = 662
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 774 KCPNCGSSRTEQYYYRNDKPSVG*XNLFHDGLIPAHVPF*WVNN--PTLGEFCFA 616
KC NCGS+ E+ R D+ + ++ D LI + V F V + +G+F A
Sbjct: 6 KCRNCGSNEIEEDNARGDRVCMNCGSVLEDSLIVSEVQFEEVGHGAAAIGQFVSA 60
>AF262374-1|AAF72065.1| 662|Drosophila melanogaster RNA polymerase
III transcriptionfactor BRF protein.
Length = 662
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 774 KCPNCGSSRTEQYYYRNDKPSVG*XNLFHDGLIPAHVPF*WVNN--PTLGEFCFA 616
KC NCGS+ E+ R D+ + ++ D LI + V F V + +G+F A
Sbjct: 6 KCRNCGSNEIEEDNARGDRVCMNCGSVLEDSLIVSEVQFEEVGHGAAAIGQFVSA 60
>AE014297-2339|AAF55409.2| 662|Drosophila melanogaster CG31256-PA
protein.
Length = 662
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 774 KCPNCGSSRTEQYYYRNDKPSVG*XNLFHDGLIPAHVPF*WVNN--PTLGEFCFA 616
KC NCGS+ E+ R D+ + ++ D LI + V F V + +G+F A
Sbjct: 6 KCRNCGSNEIEEDNARGDRVCMNCGSVLEDSLIVSEVQFEEVGHGAAAIGQFVSA 60
>AY069812-1|AAL39957.1| 937|Drosophila melanogaster SD05477p
protein.
Length = 937
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = -3
Query: 472 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 293
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 292 LNGDERFRHVTTLHAWNETPCARR 221
NG F + E P A++
Sbjct: 238 ENGIVVFSYSPISAVNYEKPKAKK 261
>AE014298-1945|AAN09334.1| 937|Drosophila melanogaster CG32627-PB,
isoform B protein.
Length = 937
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = -3
Query: 472 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 293
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 292 LNGDERFRHVTTLHAWNETPCARR 221
NG F + E P A++
Sbjct: 238 ENGIVVFSYSPISAVNYEKPKAKK 261
>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
isoform A protein.
Length = 1201
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = -3
Query: 472 FAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGV 293
FA+P ++ D + P P E V+ E + H+ Y + VP N+P G+ L+P G
Sbjct: 181 FALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRPVGE 237
Query: 292 LNGDERFRHVTTLHAWNETPCARR 221
NG F + E P A++
Sbjct: 238 ENGIVVFSYSPISAVNYEKPKAKK 261
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 237 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 133
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 237 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 133
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 237 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 133
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,029,949
Number of Sequences: 53049
Number of extensions: 841106
Number of successful extensions: 2481
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2481
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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