Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_G20
         (860 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   4.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   4.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   4.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   4.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   8.4  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 647 LVSCVSANDSLGKPS 603
           +++C +  D LGKPS
Sbjct: 531 VINCTTGKDELGKPS 545


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +3

Query: 696 AGQKQRLYNVPRQ--RWVSRSWTAAXRYWGIP 785
           +G+  R  N P    +W ++++ A  RY G+P
Sbjct: 61  SGEYDRTKNYPLDVDQWHNKTFLAVIRYNGVP 92


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +1

Query: 274 ETIIPSCVPVGYMFDVKLGAEEFGLEMPGTDDAGPNYIQILANIIDY 414
           + ++   +  GY  +VK       L+M  T    P +  I   I+DY
Sbjct: 381 DLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVFFSIYKTILDY 427


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +1

Query: 274 ETIIPSCVPVGYMFDVKLGAEEFGLEMPGTDDAGPNYIQILANIIDY 414
           + ++   +  GY  +VK       L+M  T    P +  I   I+DY
Sbjct: 381 DLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVFFSIYKTILDY 427


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +1

Query: 274 ETIIPSCVPVGYMFDVKLGAEEFGLEMPGTDDAGPNYIQILANIIDY 414
           + ++   +  GY  +VK       L+M  T    P +  I   I+DY
Sbjct: 7   DLLVRKVLGFGYESNVKYQVVPSALQMWSTSLRDPVFFSIYKTILDY 53


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +1

Query: 4   WKQTGTKFTSTGIPIKVIEQQQREMKNAEDNEKKD 108
           W  T    T+TG   +  +QQQ++ +  +     D
Sbjct: 781 WPATSVITTTTGARQQQQQQQQQQQQQQQQQSSSD 815


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,748
Number of Sequences: 438
Number of extensions: 5202
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)