Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_F18
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 35 0.073
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.39
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.68
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.68
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.68
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 31 0.89
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.89
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 31 0.89
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 6.3
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 6.3
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.3
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPP 216
PP PPPP+ FPPPPP
Sbjct: 476 PPPPPPPPPENEPEEFPPPPP 496
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPP 216
PP PPPP + PPPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPP 1360
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPP 216
P PP PPP + PPPPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPP 1361
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPP PPPPP F P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPP 216
P P PPPP PPPPP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPPP PPPPP F P
Sbjct: 753 PISGGPPPP-PPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +1
Query: 139 PXXXXPPXXNPP---PPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
P PP PP PP PPPPP P P G PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPP PPPPP F P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPP 216
P P PPPP PPPPP
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPPP PPPPP F P
Sbjct: 753 PISGGPPPP-PPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +1
Query: 139 PXXXXPPXXNPP---PPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
P PP PP PP PPPPP P P G PP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPP PPPPP F P P
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPP 216
P P PPPP PPPPP
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPPP PPPPP F P
Sbjct: 336 PISGGPPPP-PPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +1
Query: 139 PXXXXPPXXNPP---PPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
P PP PP PP PPPPP P P G PP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 130 MXKPXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
M P PP PPP PPPPP+ P P
Sbjct: 684 MDFPDTEAPPLTTRPPPVTVRNTRPPPPPQIPQPRSP 720
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPPP PPPPP P P
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPPP PPPP P
Sbjct: 53 PQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPP F PPPP P P
Sbjct: 35 PPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP 68
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 130 MXKPXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
M P PP PPP PPPPP+ P P
Sbjct: 684 MDFPDTEAPPLTTRPPPVTVRNTRPPPPPQIPQPRSP 720
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 130 MXKPXXXXPPXXNPPPPKEXXXXFPPPPPKXFXP 231
M P PP P PP PPPPP F P
Sbjct: 295 MWPPPPPPPPGRTPGPPGMPGMP-PPPPPSRFGP 327
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPP 216
PP PP P PPPPP
Sbjct: 366 PPPSRPPAPPSGHGMIPPPPP 386
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 169 PPPPKEXXXXFPPPPPKXFXPXXP 240
PPPP PPPPP P P
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 130 MXKPXXXXPPXXNPPPPKEXXXXFPPPPPKXFXP 231
M P PP P PP PPPPP F P
Sbjct: 305 MWPPPPPPPPGRTPGPPGMPGMP-PPPPPSRFGP 337
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPP 216
PP PP P PPPPP
Sbjct: 376 PPPSRPPAPPSGHGMIPPPPP 396
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 169 PPPPKEXXXXFPPPPPKXFXPXXP 240
PPPP PPPPP P P
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPP 321
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
PP +PPPP PPPP+ P P G PP
Sbjct: 275 PPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
P +PPPP+ PPPPP P P PP
Sbjct: 259 PAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
PP +PPPP PPPP+ P P G PP
Sbjct: 296 PPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
P +PPPP+ PPPPP P P PP
Sbjct: 280 PAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
PP +PPPP PPPP+ P P G PP
Sbjct: 281 PPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPPKXFXPXXPFXXXXXXXLGXXPP 282
P +PPPP+ PPPPP P P PP
Sbjct: 265 PAAGSPPPPRTGS---PPPPPTGSPPPPPAGGSPPPPRAGSPP 304
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 136 KPXXXXPPXXNPPPPKEXXXXFPPPPP 216
+P PP PPPP +PPPPP
Sbjct: 131 QPPPPPPPPHYPPPPPH----YPPPPP 153
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 157 PXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PPP +PPPPP + P P
Sbjct: 127 PYQQQPPPPPPPPHYPPPPP-HYPPPPP 153
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP PPP PPPPP P P
Sbjct: 61 PAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 136 KPXXXXPPXXNPPPPKEXXXXFPPPPPKXFXP 231
+P P PPPP++ PPPP+ P
Sbjct: 712 RPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHP 743
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 136 KPXXXXPPXXNPPPPKEXXXXFPPPPPKXFXP 231
+P P PPPP++ PPPP+ P
Sbjct: 712 RPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHP 743
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 154 PPXXNPPPPKEXXXXFPPPPP 216
PP PPPP PPPPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPP 596
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP P PP+ PPPPP P P
Sbjct: 770 PPPPPPPSAIPLPPR-LQGGIPPPPPLGIIPPPP 802
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 139 PXXXXPPXXNPPPPKEXXXXFPPPPPKXFXPXXP 240
P PP P PP+ PPPPP P P
Sbjct: 770 PPPPPPPSAIPLPPR-LQGGIPPPPPLGIIPPPP 802
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 130 MXKPXXXXPPXXN--PPPPKEXXXXFPPPPP 216
M P PP PPPP+ FPPPPP
Sbjct: 282 MHHPYAMMPPPFGFFPPPPR---GHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +1
Query: 130 MXKPXXXXPPXXN--PPPPKEXXXXFPPPPP 216
M P PP PPPP+ FPPPPP
Sbjct: 282 MHHPYAMMPPPFGFFPPPPR---GHFPPPPP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,004,582
Number of Sequences: 27780
Number of extensions: 112467
Number of successful extensions: 1181
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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