Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_F17
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.9
U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidan... 29 4.5
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.9
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 5.9
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 5.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 5.9
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 5.9
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 28 7.8
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 236 PPXKPGVXKKIXPRLGPPKRKPEPAPFRV*ENPPGRPXKTPGSRIP 99
PP P V + PR PP+R P P +P RP +TP S P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPP-----SPQRRPPRTPPSPEP 180
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 122 PPPPPPPRKSRAGGSSPPP 140
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -2
Query: 266 PXXPXXFXGXPPXKPGVXK-KIXPRLGPPKRKPEPAPFR-V*ENPPGRPXKTPGSRIPXS 93
P P G PP G+ + P PP R PAP V PPG P P R+P
Sbjct: 133 PPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIG 192
Query: 92 XKP 84
P
Sbjct: 193 HGP 195
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -2
Query: 266 PXXPXXFXGXPPXKPGVXK-KIXPRLGPPKRKPEPAPFR-V*ENPPGRPXKTPGSRIPXS 93
P P G PP G+ + P PP R PAP V PPG P P R+P
Sbjct: 133 PPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIG 192
Query: 92 XKP 84
P
Sbjct: 193 HGP 195
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = -2
Query: 275 GGSPXXPXXFXGXPPXKPGVXKKIXP---RLGPPKRKPEPAPFRV*ENPPGRPXKTP 114
GG P P F G P P + I P G P P P+ V PP RP KTP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP-RP-KTP 135
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 407 YXGGGKXXXLFWGGXAXPPPXFFXPPPP 490
+ GG GG PPP F PPPP
Sbjct: 90 FAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
>U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidance
abnormal protein10 protein.
Length = 419
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -2
Query: 236 PPXKPGVXKKIXPRLGPPKRKPEPAPFRV*ENPPGRPXKTPGSR 105
PP KP K L PPK K P+P R G ++ SR
Sbjct: 94 PPRKPTAQKS--RELSPPKAKKSPSPSRTGSGDSGSRKESSASR 135
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 476 PPPPPPPPPENEPEEFPPP 494
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 477 PPPPPPPPENEPEEFPPPP 495
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 478 PPPPPPPENEPEEFPPPPP 496
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPP 57
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPP 58
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 489 GGGGXKKXGGGXAXPP 442
GGGG K GGG A PP
Sbjct: 30 GGGGNKSAGGGGAPPP 45
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 489 GGGGXKKXGGGXAXPP 442
GGGG K GGG A PP
Sbjct: 30 GGGGASKVGGGAAPPP 45
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 133 PPPPPPPHYPPPPPHYPPP 151
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPP 744
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPP 760
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 769 PPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPP 744
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPP 760
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 769 PPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 157 PPPPPPPVSVPSSKPTPPP 175
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 157 PPPPPPPVSVPSSKPTPPP 175
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 68 PPPPPPPPLISILQQAPPP 86
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 69 PPPPPPPLISILQQAPPPP 87
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 84 PPPPPPPPPPTLKAPPPPP 102
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPP 327
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 325 PPPPPPPGGLPPISGGPPP 343
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPP 359
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPP 360
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 352 PPPPPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 353 PPPPPPPPGGFKGGPPPPP 371
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPP 1358
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPP 1359
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPP 1360
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 297 PPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 318 PPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 303 PPPPPPPRGSPPTGSLPPP 321
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPP 579
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPP 594
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 577 PPPPPPPPMLGGPPPPPPP 595
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 578 PPPPPPPMLGGPPPPPPPP 596
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 1013 PPPPPPPPADFFANIAPPP 1031
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 853 PPPPPPPXXXXXXXXXPPP 797
PPPPPPP PPP
Sbjct: 252 PPPPPPPPADFFANIAPPP 270
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 197 RLGPPKRKPEPAPFRV*ENPPGRPXKT 117
R PP++KPEP P V E P P ++
Sbjct: 664 RKRPPRKKPEPKPNIVFETTPNPPTES 690
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,007,772
Number of Sequences: 27780
Number of extensions: 273459
Number of successful extensions: 4690
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2510
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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