Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_F11
         (830 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1228|AAF58703.1|  120|Drosophila melanogaster CG13227-P...    31   1.5  
AY119067-1|AAM50927.1|  217|Drosophila melanogaster LP08165p pro...    31   1.9  

>AE013599-1228|AAF58703.1|  120|Drosophila melanogaster CG13227-PA
           protein.
          Length = 120

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +2

Query: 257 PPPPPFXXXPPPRGGGNFIKNPXGGF 334
           PPPP F   PPP  GG F     GGF
Sbjct: 71  PPPPFFGPPPPPYYGGGFGGGFGGGF 96


>AY119067-1|AAM50927.1|  217|Drosophila melanogaster LP08165p
           protein.
          Length = 217

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +2

Query: 257 PPPPPFXXXPPPRGGGN 307
           PPPPP    PPP G GN
Sbjct: 102 PPPPPAPAPPPPPGAGN 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.153    0.524 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,707,779
Number of Sequences: 53049
Number of extensions: 361805
Number of successful extensions: 2245
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2026
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)