Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_F10
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...    76   3e-14
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...    75   8e-14
03_02_0743 + 10876178-10876699                                         30   1.7  
11_05_0033 + 18500092-18501372,18502419-18502826,18502948-185029...    29   5.2  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = +1

Query: 34  MSHRKFSAPRSWVYGILSQKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL 213
           MSHRKF  PR    G L +K   RHRGKV   PKD  SKP HLT F+GYKAGMT  +  +
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 214 -TVRFKINKKKFWXGXH-LRXPPMVWFGFXGKLK-PXGTXPL 330
                K++KK+       +  PP+V  G    +K P G   L
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSL 102


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = +1

Query: 34  MSHRKFSAPRSWVYGILSQKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL 213
           MSHRKF  PR    G L +K   RHRGKV   PKD  +KP HLT F+GYKAGMT  +  +
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60

Query: 214 -TVRFKINKKKFWXGXH-LRXPPMVWFGFXGKLK-PXGTXPL 330
                K++KK+       +  PP+V  G    +K P G   L
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSL 102


>03_02_0743 + 10876178-10876699
          Length = 173

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 112 GKVXGVPKDXPSKPVHLTXFIGYKAGMTP 198
           G+V GVP D P    HL    G   GMTP
Sbjct: 108 GEVAGVPLDVPDVADHLVQLYGGDLGMTP 136


>11_05_0033 +
           18500092-18501372,18502419-18502826,18502948-18502990,
           18503236-18503282,18504582-18505901
          Length = 1032

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = +1

Query: 1   YWHFSLRLSSSMSHRKFSAPRSWVYGILSQKEVRRHRGKVXGVPKDXPSKPVHLTXFIGY 180
           YW FS+   SS  +RK  AP     GIL   E   H   +  VP    +   H T F  +
Sbjct: 241 YWLFSIPRPSSFKNRKQDAPWQDTDGILGPLESCVHALYLLFVPVLFHAASHHATLFASW 300


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,570,441
Number of Sequences: 37544
Number of extensions: 264321
Number of successful extensions: 352
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)