Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_F10
(753 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 84 2e-16
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 83 4e-16
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 83 4e-16
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 83 4e-16
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 65 1e-10
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 65 1e-10
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 65 1e-10
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 83.8 bits (198), Expect = 2e-16
Identities = 51/113 (45%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = +1
Query: 4 WHFSLRLSSSMSHRKFSAPRSWVYGILSQKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYK 183
+ F+ + MSHRKFSAPR +K RHRGKV PKD SKPVHLT FIGYK
Sbjct: 2 FRFTRLKRTDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYK 61
Query: 184 AGMTPWLXNL-TVRFKINKKKFWXGXH-LRXPPMVWFGFXGKLK-PXGTXPLL 333
AGMT + KINKK+ L PPM+ G G ++ P G L+
Sbjct: 62 AGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALV 114
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 83.0 bits (196), Expect = 4e-16
Identities = 50/103 (48%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +1
Query: 34 MSHRKFSAPRSWVYGILSQKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL 213
MSHRKFSAPR +K RHRGKV PKD SKPVHLT FIGYKAGMT +
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 -TVRFKINKKKFWXGXH-LRXPPMVWFGFXGKLK-PXGTXPLL 333
KINKK+ L PPM+ G G ++ P G L+
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALV 103
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 83.0 bits (196), Expect = 4e-16
Identities = 50/103 (48%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +1
Query: 34 MSHRKFSAPRSWVYGILSQKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL 213
MSHRKFSAPR +K RHRGKV PKD SKPVHLT FIGYKAGMT +
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 -TVRFKINKKKFWXGXH-LRXPPMVWFGFXGKLK-PXGTXPLL 333
KINKK+ L PPM+ G G ++ P G L+
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALV 103
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 83.0 bits (196), Expect = 4e-16
Identities = 50/103 (48%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +1
Query: 34 MSHRKFSAPRSWVYGILSQKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL 213
MSHRKFSAPR +K RHRGKV PKD SKPVHLT FIGYKAGMT +
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 214 -TVRFKINKKKFWXGXH-LRXPPMVWFGFXGKLK-PXGTXPLL 333
KINKK+ L PPM+ G G ++ P G L+
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALV 103
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 64.9 bits (151), Expect = 1e-10
Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 QKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL-TVRFKINKKKFWXGXH- 261
+K RHRGKV PKD SKPVHLT FIGYKAGMT + KINKK+
Sbjct: 6 KKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTV 65
Query: 262 LRXPPMVWFGFXGKLK-PXGTXPLL 333
L PPM+ G G ++ P G L+
Sbjct: 66 LETPPMIVVGAVGYIETPFGLRALV 90
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 64.9 bits (151), Expect = 1e-10
Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 QKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL-TVRFKINKKKFWXGXH- 261
+K RHRGKV PKD SKPVHLT FIGYKAGMT + KINKK+
Sbjct: 6 KKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTV 65
Query: 262 LRXPPMVWFGFXGKLK-PXGTXPLL 333
L PPM+ G G ++ P G L+
Sbjct: 66 LETPPMIVVGAVGYIETPFGLRALV 90
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 64.9 bits (151), Expect = 1e-10
Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 QKEVRRHRGKVXGVPKDXPSKPVHLTXFIGYKAGMTPWLXNL-TVRFKINKKKFWXGXH- 261
+K RHRGKV PKD SKPVHLT FIGYKAGMT + KINKK+
Sbjct: 6 KKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTV 65
Query: 262 LRXPPMVWFGFXGKLK-PXGTXPLL 333
L PPM+ G G ++ P G L+
Sbjct: 66 LETPPMIVVGAVGYIETPFGLRALV 90
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,311,675
Number of Sequences: 53049
Number of extensions: 399634
Number of successful extensions: 559
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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