Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_F09
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.2  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   5.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.9  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 508 SFSNLFVGPSGVSYPVLQLDNTKLAPQRGKERSAR 612
           S  NLF+ P+     V  LD+T+ +P  G   S R
Sbjct: 9   SIGNLFIEPNRYRRIVSGLDSTRGSPAPGSRHSIR 43


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 527 WDPLEYHTQCSSWTTQNWRLNVVRKGVP 610
           WD L +H +   W  +   LNVV+K VP
Sbjct: 763 WDLLIHHFRQLVWLHRVRDLNVVQKVVP 790


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +3

Query: 258 WPGCNACRVGSRV*SRAATNQGLSLSAPGATQRPKGFPFGKPRAPL 395
           WP  +   +G+RV  R  T+  L + A G   R      G P A L
Sbjct: 400 WPTEDKHEIGNRVPLREVTDLELQIIASGMQPRKAPGLDGVPNAAL 445


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,945
Number of Sequences: 2352
Number of extensions: 18067
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)