Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_F09
(849 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK130638-1|BAC85400.1| 226|Homo sapiens protein ( Homo sapiens ... 33 1.7
U44975-1|AAC23699.1| 290|Homo sapiens DNA-binding protein CPBP ... 31 5.3
BT006778-1|AAP35424.1| 283|Homo sapiens core promoter element b... 31 5.3
BC000311-1|AAH00311.1| 283|Homo sapiens Kruppel-like factor 6 p... 31 5.3
AL513303-1|CAH74049.1| 283|Homo sapiens core promoter element b... 31 5.3
AL450322-1|CAH71010.1| 283|Homo sapiens core promoter element b... 31 5.3
AF284036-1|AAM73548.1| 283|Homo sapiens core promoter element b... 31 5.3
AB017493-1|BAA33050.1| 283|Homo sapiens DNA-binding zinc finger... 31 5.3
>AK130638-1|BAC85400.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ27128 fis, clone SPL07659. ).
Length = 226
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 652 AVGTSGEVRVCM*CGHSFPYHVEAPVLCCPAGALG 548
+ G G + CGH+ P + +P+ CCPA +G
Sbjct: 7 SAGCIGNSKCYTACGHNLPSPLLSPLCCCPAALMG 41
>U44975-1|AAC23699.1| 290|Homo sapiens DNA-binding protein CPBP
protein.
Length = 290
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 458 TTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLNVVRKGVPASHAHANFA 637
T ++ + + RT P+R C W+ E+ S T+++R + K SH F+
Sbjct: 219 TKSSHLKAHQRTHTGEKPYR-CSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFS 277
Query: 638 RCTYRAL 658
R + AL
Sbjct: 278 RSDHLAL 284
>BT006778-1|AAP35424.1| 283|Homo sapiens core promoter element
binding protein protein.
Length = 283
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 458 TTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLNVVRKGVPASHAHANFA 637
T ++ + + RT P+R C W+ E+ S T+++R + K SH F+
Sbjct: 212 TKSSHLKAHQRTHTGEKPYR-CSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFS 270
Query: 638 RCTYRAL 658
R + AL
Sbjct: 271 RSDHLAL 277
>BC000311-1|AAH00311.1| 283|Homo sapiens Kruppel-like factor 6
protein.
Length = 283
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 458 TTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLNVVRKGVPASHAHANFA 637
T ++ + + RT P+R C W+ E+ S T+++R + K SH F+
Sbjct: 212 TKSSHLKAHQRTHTGEKPYR-CSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFS 270
Query: 638 RCTYRAL 658
R + AL
Sbjct: 271 RSDHLAL 277
>AL513303-1|CAH74049.1| 283|Homo sapiens core promoter element
binding protein protein.
Length = 283
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 458 TTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLNVVRKGVPASHAHANFA 637
T ++ + + RT P+R C W+ E+ S T+++R + K SH F+
Sbjct: 212 TKSSHLKAHQRTHTGEKPYR-CSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFS 270
Query: 638 RCTYRAL 658
R + AL
Sbjct: 271 RSDHLAL 277
>AL450322-1|CAH71010.1| 283|Homo sapiens core promoter element
binding protein protein.
Length = 283
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 458 TTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLNVVRKGVPASHAHANFA 637
T ++ + + RT P+R C W+ E+ S T+++R + K SH F+
Sbjct: 212 TKSSHLKAHQRTHTGEKPYR-CSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFS 270
Query: 638 RCTYRAL 658
R + AL
Sbjct: 271 RSDHLAL 277
>AF284036-1|AAM73548.1| 283|Homo sapiens core promoter element
binding protein protein.
Length = 283
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 458 TTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLNVVRKGVPASHAHANFA 637
T ++ + + RT P+R C W+ E+ S T+++R + K SH F+
Sbjct: 212 TKSSHLKAHQRTHTGEKPYR-CSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFS 270
Query: 638 RCTYRAL 658
R + AL
Sbjct: 271 RSDHLAL 277
>AB017493-1|BAA33050.1| 283|Homo sapiens DNA-binding zinc
finger(GBF) protein.
Length = 283
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 458 TTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLNVVRKGVPASHAHANFA 637
T ++ + + RT P+R C W+ E+ S T+++R + K SH F+
Sbjct: 212 TKSSHLKAHQRTHTGEKPYR-CSWEGCEWRFARSDELTRHFRKHTGAKPFKCSHCDRCFS 270
Query: 638 RCTYRAL 658
R + AL
Sbjct: 271 RSDHLAL 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,661,358
Number of Sequences: 237096
Number of extensions: 2889647
Number of successful extensions: 7605
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7604
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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