Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_F09
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 31 1.4
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 31 1.4
U41542-4|AAK39154.1| 437|Caenorhabditis elegans Hypothetical pr... 29 5.5
U41542-3|AAK39156.1| 403|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 29 5.5
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 29 5.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 7.3
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 28 7.3
Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical pr... 28 9.6
U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical pr... 28 9.6
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 79 LFCSPAASLVARAIRSVHSVGRFAGRRCAWLV 174
L SP L + + V +GRF G RCA LV
Sbjct: 97 LMVSPTRELALQTFKVVKELGRFTGLRCACLV 128
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 79 LFCSPAASLVARAIRSVHSVGRFAGRRCAWLV 174
L SP L + + V +GRF G RCA LV
Sbjct: 97 LMVSPTRELALQTFKVVKELGRFTGLRCACLV 128
>U41542-4|AAK39154.1| 437|Caenorhabditis elegans Hypothetical
protein C07A12.7a protein.
Length = 437
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 410 VSNILSV*SMADSSPATTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLN 589
+SN+ S A S T A E V PF T + +E T + T+NW LN
Sbjct: 1 MSNVSEQVSKAAESARETVAKVGESVSDFFQGNPFATPVGRKIELATDANLLATENWGLN 60
Query: 590 V 592
+
Sbjct: 61 M 61
>U41542-3|AAK39156.1| 403|Caenorhabditis elegans Hypothetical
protein C07A12.7b protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 410 VSNILSV*SMADSSPATTEAYTREYVRTSLATIPFRTCLWDPLEYHTQCSSWTTQNWRLN 589
+SN+ S A S T A E V PF T + +E T + T+NW LN
Sbjct: 1 MSNVSEQVSKAAESARETVAKVGESVSDFFQGNPFATPVGRKIELATDANLLATENWGLN 60
Query: 590 V 592
+
Sbjct: 61 M 61
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 441 LTVHPQPPKHTHENTSAPRSLPFLFELVCG 530
L++H Q KH H P S+ F CG
Sbjct: 172 LSIHMQSDKHLHAVQELPNSIEFAANFACG 201
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 691 KASTDSPAAPXKRAVGTSG--EVRVCM*CGHSFPYHVE 584
+A ++ AP R + T G E+ C CGHS +H E
Sbjct: 47 RAERENDFAPMTRDLETLGSEEIIECRTCGHSISFHAE 84
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 503 TIPFRTCLWDPLEYHTQCSSW--TTQNWRLNVVRKGVPASHAHANFAR 640
T R C W P E S+W T W + ++GV A + H N ++
Sbjct: 443 TAVVRECDWHPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHPNISQ 490
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 503 TIPFRTCLWDPLEYHTQCSSW--TTQNWRLNVVRKGVPASHAHANFAR 640
T R C W P E S+W T W + ++GV A + H N ++
Sbjct: 484 TAVVRECDWHPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHPNISQ 531
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 797 SHQXAGSPHNSMDNPPDGVXIRDVGA 720
S + A SP +S+DN P + IRD+G+
Sbjct: 816 SVKIADSPSSSIDNLPKTISIRDIGS 841
>Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 550 PVLQLDNTKLAPQRGKERSARITCTRELR 636
P+L+ DN + Q G+ER++R + + LR
Sbjct: 120 PILKADNGRATSQSGRERNSRSSIQQALR 148
>Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 550 PVLQLDNTKLAPQRGKERSARITCTRELR 636
P+L+ DN + Q G+ER++R + + LR
Sbjct: 120 PILKADNGRATSQSGRERNSRSSIQQALR 148
>U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical
protein R04A9.2 protein.
Length = 1057
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 355 DRRAFPLASRVRPFSG---ADSLKYIKCIIYG*QFTRNHRSIHTRIRPHLARYHSFSNLF 525
D R F L+ V FSG + +C+++ F RN P +A Y + ++
Sbjct: 130 DGRRFELSLGVSAFSGDVNRQQRRQAQCLLFRAWFKRNPELFKGMTDPAIAAYDAAETIY 189
Query: 526 VGPS 537
VG S
Sbjct: 190 VGCS 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,764,221
Number of Sequences: 27780
Number of extensions: 407511
Number of successful extensions: 1205
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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