Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_F07
         (868 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0345 + 4529272-4530514,4530634-4530740                           31   1.6  
09_01_0019 + 403078-404211                                             29   6.4  

>04_01_0345 + 4529272-4530514,4530634-4530740
          Length = 449

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 382 GSFCDYHGCHG*RGIRGSIPEREPEKRLPHPRKAAGAQITHSRHGE 519
           G  CD+  CHG   +   I    P   LPH   A  A++  S  GE
Sbjct: 172 GGGCDHRSCHGGPFLVALIWSHSPSPFLPHLPGATSARVYSSDTGE 217


>09_01_0019 + 403078-404211
          Length = 377

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 435 DSGEGA*ETATTSKEGSRRANYPLPARGGSDEK*RYG 545
           DSG GA ++A   K  SRR  +      GSD   R+G
Sbjct: 326 DSGSGASDSADDRKRSSRRRRHRKSESSGSDGDERHG 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,629,328
Number of Sequences: 37544
Number of extensions: 524196
Number of successful extensions: 1224
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)