Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_F07
         (868 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129645-1|BAC85205.1|  128|Homo sapiens protein ( Homo sapiens ...    32   2.4  
BC051716-1|AAH51716.1|  469|Homo sapiens RUN and FYVE domain con...    30   9.5  
AF112221-1|AAF17208.1|  382|Homo sapiens rap2 interacting protei...    30   9.5  
AB020678-1|BAA74894.2|  471|Homo sapiens KIAA0871 protein protein.     30   9.5  

>AK129645-1|BAC85205.1|  128|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26134 fis, clone TMS03713. ).
          Length = 128

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -1

Query: 739 SVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSXITAAAGTRLALQLFLV 593
           ++SPR+ C+ + +  CN  L   +++S+   S ++   G+R   QLF V
Sbjct: 29  ALSPRLECSGAISAHCNLRLLG-SSYSLASASRVSGITGSRHHAQLFFV 76


>BC051716-1|AAH51716.1|  469|Homo sapiens RUN and FYVE domain
           containing 3 protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 548 SPVSLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSGIEPLIP 420
           +P+  FFV    C +  + A   FLG    F G L  +E L+P
Sbjct: 99  APLQQFFVVMEHCLKHGLKAKKTFLGQNKSFWGPLELVEKLVP 141


>AF112221-1|AAF17208.1|  382|Homo sapiens rap2 interacting protein x
           protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 548 SPVSLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSGIEPLIP 420
           +P+  FFV    C +  + A   FLG    F G L  +E L+P
Sbjct: 35  APLQQFFVVMEHCLKHGLKAKKTFLGQNKSFWGPLELVEKLVP 77


>AB020678-1|BAA74894.2|  471|Homo sapiens KIAA0871 protein protein.
          Length = 471

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 548 SPVSLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSGIEPLIP 420
           +P+  FFV    C +  + A   FLG    F G L  +E L+P
Sbjct: 101 APLQQFFVVMEHCLKHGLKAKKTFLGQNKSFWGPLELVEKLVP 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,228,603
Number of Sequences: 237096
Number of extensions: 2739281
Number of successful extensions: 5560
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5560
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)