Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_F03
(858 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 132 5e-32
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 69 9e-13
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 56 6e-09
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 48 2e-06
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 45 2e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 42 8e-05
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 38 0.002
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 0.002
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 38 0.002
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.004
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 36 0.010
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 36 0.010
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 34 0.022
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.6
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 3.4
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 4.5
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 4.5
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 27 4.5
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 27 4.5
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 6.0
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 132 bits (320), Expect = 5e-32
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 426
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 427 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR*QEDAVLALLRW*SGLRVVPPEP 606
++S WRGN ANV+RYFPTQALNFAFKDK+K++F G + + D +W +G +
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERD---GYAKWFAG-NLASGGA 141
Query: 607 PLCASCTPLTSHVPVLPPM-----SVRGDGQREFSGLGNCISKIFKSDGLIGLYRRF 762
AS + S + S + G+R+F+GL + K ++SDGL GLYR F
Sbjct: 142 AGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGF 198
Score = 50.8 bits (116), Expect = 2e-07
Identities = 34/83 (40%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRLAADVGKGRWXA*ILRSRKLHQQDLQVRRSD--RXXXXX 761
GGAAGA SL FVY LD+ARTRLA D K + L + RSD R
Sbjct: 139 GGAAGAASLLFVYSLDYARTRLAND-AKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRG 197
Query: 762 XXXXXXXIIIYRASYFGFYETXR 830
I++YR YFG Y+T +
Sbjct: 198 FGPSVVGIVVYRGLYFGMYDTLK 220
Score = 39.1 bits (87), Expect = 8e-04
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 429
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 430 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 534
+RG +V+ + L F D K V L G
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG 226
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 68.9 bits (161), Expect = 9e-13
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 445 GNFANVIRYFPTQALNFAFKDKYKQVFLGGR 537
GN N +R FP A+ FA + KQ L R
Sbjct: 78 GNGTNCLRAFPYGAVQFATFNMLKQRALKNR 108
Score = 43.6 bits (98), Expect = 4e-05
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +1
Query: 220 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 399
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 400 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 495
I K +G+ F+RG +N+++ P ++ +
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
Score = 31.9 bits (69), Expect = 0.12
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRLAAD 662
G AGA S YPLD ARTRL+ +
Sbjct: 122 GAIAGAASCATTYPLDIARTRLSIE 146
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 56.0 bits (129), Expect = 6e-09
Identities = 30/91 (32%), Positives = 50/91 (54%)
Frame = +1
Query: 256 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 435
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 436 FWRGNFANVIRYFPTQALNFAFKDKYKQVFL 528
++G+ A + R FP + F ++ ++V +
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLI 108
Score = 29.1 bits (62), Expect = 0.84
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRLAADVGKGR 677
G AG S+ F YPL+ R RLA G+
Sbjct: 123 GSLAGTCSVFFTYPLELIRVRLAYITNTGK 152
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/95 (26%), Positives = 49/95 (51%)
Frame = +1
Query: 238 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 417
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 418 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 522
G+ SF+ GN NV++ P ++ F + K+V
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRV 216
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +1
Query: 271 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 450
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 451 FANVIRYFPTQALNFAFKDKYKQ 519
N+++ P+ A+++ + K+
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSF 438
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 439 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 531
+RG ++ FP A + + K+ ++G
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIG 318
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRL-AADVGKGR 677
GG AG+ + F+YP+D + R+ +D+ +G+
Sbjct: 235 GGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQ 265
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 44.8 bits (101), Expect = 2e-05
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 5/180 (2%)
Frame = +1
Query: 238 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 417
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 418 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR*QEDAVLALLRW*SGLRVVP 597
+G +RG ++ P +AL FA D Y +++ ++D+ AL
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPAL----------- 106
Query: 598 PEPPLCASCTPLTSHVPVLP--PMSVRGDGQR---EFSGLGNCISKIFKSDGLIGLYRRF 762
L SC T V+P M +R + +++G +C +KI K + ++ LY F
Sbjct: 107 --SILTGSCAGFTETFVVVPFELMKIRLQDVKNASKYNGTVDCFTKIVKQERILALYNGF 164
Score = 34.3 bits (75), Expect = 0.022
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGL 429
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++ +
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERI 157
Query: 430 LSFWRGNFANVIRYFPTQALNFAFKDKYK 516
L+ + G A + R+ A F K +
Sbjct: 158 LALYNGFEATMWRHVVWNAGYFGVIQKIR 186
Score = 31.1 bits (67), Expect = 0.21
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 573 VIWPPGGAAGATSLCFVYPLDFARTRLAADVGK 671
V + G AG + + +YPLD +TR+ VGK
Sbjct: 10 VTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGK 42
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 42.3 bits (95), Expect = 8e-05
Identities = 24/88 (27%), Positives = 48/88 (54%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 445 GNFANVIRYFPTQALNFAFKDKYKQVFL 528
G ++ P A+++A + K++ +
Sbjct: 268 GIRPRMVVAMPATAVSWAAYEAGKEILI 295
Score = 39.5 bits (88), Expect = 6e-04
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 441
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 442 RGNFANVIRYFPTQALNFAFKDKYK 516
RG + ++ P+ A+ F+ + +K
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFK 103
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.9 bits (84), Expect = 0.002
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 247 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 423
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 424 GLLSFWRG 447
GL +F++G
Sbjct: 70 GLAAFYKG 77
Score = 34.7 bits (76), Expect = 0.017
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 241 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 420
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 421 QGLLSFWRG 447
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 441
FL G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 442 RGNFANVIRYFPTQALNFAFKDKYKQV 522
G + R + + F +K ++
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKVMEI 287
Score = 31.1 bits (67), Expect = 0.21
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRL 653
GG AGA + YP +FA+TRL
Sbjct: 24 GGVAGAIEISITYPAEFAKTRL 45
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 256 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIVDAFVRIPKEQG 426
KD +AGG + S VAP++ VK Q Q + G + + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 427 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 525
+ +RG ++ Y P+ ++ F +K K +F
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 364 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 462
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRLAA 659
GGAAG S V PLD +TR A
Sbjct: 12 GGAAGLASSLVVAPLDVVKTRKQA 35
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.004
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 438
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 439 WRG 447
RG
Sbjct: 87 QRG 89
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 35.5 bits (78), Expect = 0.010
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Frame = +1
Query: 199 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIA 366
V +T +N SN P + F+AGG++ + A AP++ VK LQ KQ A
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTA 90
Query: 367 ADQ-----RYKGIVDAFV---RIPKEQGLLSFWRGNFANVIRYFPTQALNF 495
+ Y+ +D + + +G + +RG N+I P +++NF
Sbjct: 91 KSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINF 141
Score = 30.3 bits (65), Expect = 0.37
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 274 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 453
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 454 ANVIRYFPTQALNF 495
A+++R P + F
Sbjct: 337 AHLLRVVPNACILF 350
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRLAADVGKGRW 680
GG AG PLD +TRL +D K R+
Sbjct: 55 GGVAGMLGAIATAPLDVVKTRLQSDFYKDRF 85
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 35.5 bits (78), Expect = 0.010
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 445 GNFANVIRYFPTQALNFAFKDKYKQV 522
GN + Y A F K K +
Sbjct: 70 GNVVAELLYLVYGAAEFVAFSKLKHL 95
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 444
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 445 GNFANVIRYFP 477
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 34.3 bits (75), Expect = 0.022
Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 3/138 (2%)
Frame = +1
Query: 352 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA---FKDKYKQV 522
+KQ A Q KG F + KE+G+ RG A +R A F +K +
Sbjct: 134 AKQAATGQEVKGTFRVFADLYKEKGIRGINRGVNAVALRQMTNWGSRLALSRFLEKPIRY 193
Query: 523 FLGGR*QEDAVLALLRW*SGLRVVPPEPPLCASCTPLTSHVPVLPPMSVRGDGQREFSGL 702
F G E +G R V SC V + S+ Q G+
Sbjct: 194 FTGRTEAEPLT-------TGQRFVASVSAGALSCWNQPLEVARVEMQSLTKGIQHSSPGI 246
Query: 703 GNCISKIFKSDGLIGLYR 756
I I+K++G+ GLYR
Sbjct: 247 MQTIMSIYKNNGIKGLYR 264
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 583 LRVVPPEPPLCASCTPLTSHVPVLPPMSVRG 675
L+ PP PP TP + +PV PP + G
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMG 759
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.6
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 577 SGLRVVPPEPPLCASCTPLTSHVPVLPPMSVRGDGQREFSGLGNCISKIFKSDGLIGL-Y 753
+G+ PP PP + P + P P S+ Q++ G N ++ I S G+ L
Sbjct: 461 AGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELPQQD--GRANLMASIRASGGMDLLKS 518
Query: 754 RRFXVCPCKVSSST 795
R+ P S+ T
Sbjct: 519 RKVSASPSVASTKT 532
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 580 GLRVVPPEPPLCASCTPLTSHVPVLPPM 663
G PP PP PL + +P PP+
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPL 469
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 438
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 439 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 531
W G + R P A + ++ + LG
Sbjct: 200 WSGVSVTLWRDVPFSAFYWWSYERIRLFLLG 230
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 697 GLGNCISKIFKSDGLIGLYRRF 762
G+ + + ++KS+GL+GL+R F
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGF 304
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/102 (20%), Positives = 39/102 (38%)
Frame = +1
Query: 220 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 399
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 400 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 525
F I ++GL + G +I Y + F + +K +
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKY 106
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAADQRYKGIVDAFVRIPKEQG 426
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 427 LLSFWRGNFANVIRYF 474
+ FW G F + + F
Sbjct: 227 AVKFWNGKFFTLSQSF 242
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/40 (22%), Positives = 24/40 (60%)
Frame = -2
Query: 776 HGHTXNLLYRPIRPSDLKILLMQFPRPENSRXPSPLTDIG 657
H H+ +L++R ++P ++ +++ P +R + ++D G
Sbjct: 764 HLHSLDLVHRDLKPQNILLVVNNSPNLSKTRVRALISDFG 803
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 99 YEITPNLLFKNQELVFRDPPSACAATPTSTY 191
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 404 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 297
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,368,248
Number of Sequences: 5004
Number of extensions: 69132
Number of successful extensions: 273
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -