Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_F03
(858 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 229 2e-62
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 229 2e-62
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 2.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 2.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 4.8
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 229 bits (561), Expect = 2e-62
Identities = 118/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Frame = +1
Query: 223 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 402
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 403 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR*QEDAVLALLRW*SG 582
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGG D LR+ G
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGG---VDKNTQFLRYFVG 117
Query: 583 LRVVPPEPPLCASC--TPLTSHVPVLPPMSVRGDGQREFSGLGNCISKIFKSDGLIGLYR 756
+ C PL L + G+REF+GLGNC++KIFK+DG+ GLYR
Sbjct: 118 NLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYR 177
Query: 757 RFXV 768
F V
Sbjct: 178 GFGV 181
Score = 81.0 bits (191), Expect = 1e-17
Identities = 47/89 (52%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRLAADVGKGRWXA*ILRSRKLHQQDLQVRRSD--RXXXXX 761
GGAAGATSLCFVYPLDFARTRLAADVGK L ++ ++D
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAADVGKAGGER---EFTGLGNCLTKIFKADGITGLYRG 178
Query: 762 XXXXXXXIIIYRASYFGFYETXRGMLXEP 848
IIIYRA+YFGFY+T RGML +P
Sbjct: 179 FGVSVQGIIIYRAAYFGFYDTARGMLPDP 207
Score = 28.7 bits (61), Expect = 0.072
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 429
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 430 LSFWRGNFANVIRYFPTQALNFAFKD 507
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 310 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 468
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 229 bits (561), Expect = 2e-62
Identities = 118/184 (64%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Frame = +1
Query: 223 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 402
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 403 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR*QEDAVLALLRW*SG 582
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGG D LR+ G
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGG---VDKNTQFLRYFVG 117
Query: 583 LRVVPPEPPLCASC--TPLTSHVPVLPPMSVRGDGQREFSGLGNCISKIFKSDGLIGLYR 756
+ C PL L + G+REF+GLGNC++KIFK+DG+ GLYR
Sbjct: 118 NLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYR 177
Query: 757 RFXV 768
F V
Sbjct: 178 GFGV 181
Score = 81.0 bits (191), Expect = 1e-17
Identities = 47/89 (52%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +3
Query: 588 GGAAGATSLCFVYPLDFARTRLAADVGKGRWXA*ILRSRKLHQQDLQVRRSD--RXXXXX 761
GGAAGATSLCFVYPLDFARTRLAADVGK L ++ ++D
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLAADVGKAGGER---EFTGLGNCLTKIFKADGITGLYRG 178
Query: 762 XXXXXXXIIIYRASYFGFYETXRGMLXEP 848
IIIYRA+YFGFY+T RGML +P
Sbjct: 179 FGVSVQGIIIYRAAYFGFYDTARGMLPDP 207
Score = 28.7 bits (61), Expect = 0.072
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 429
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 430 LSFWRGNFANVIRYFPTQALNFAFKD 507
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 310 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 468
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 592 VPPEPPLCASCTPLTSHVPVLPPMSVRGDG 681
+PPE CA+ T + V PP + +G
Sbjct: 1113 IPPEDVRCAALTSQSLQVSWQPPPNTHSNG 1142
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 592 VPPEPPLCASCTPLTSHVPVLPPMSVRGDG 681
+PPE CA+ T + V PP + +G
Sbjct: 1109 IPPEDVRCAALTSQSLQVSWQPPPNTHSNG 1138
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 3.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 592 VPPEPPLCASCTPLTS 639
VP +PP +CT LTS
Sbjct: 1080 VPEQPPHDTTCTTLTS 1095
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -3
Query: 613 REVAPAAPPGGQITSEVTPELR 548
++++PA P G + + TPE++
Sbjct: 272 KKLSPATPKGSKCSMITTPEIK 293
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,002
Number of Sequences: 438
Number of extensions: 5150
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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