Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_E20
(838 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 55 9e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 49 6e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 3e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 46 3e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 5e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 3e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 3e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 36 4e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 5e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.004
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.013
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.12
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.86
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.86
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.86
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.86
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 54.8 bits (126), Expect = 9e-10
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 522 QTCTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGAWDV 629
QTC KFGS N D++ + +K + ++SG WD+
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 515
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 516 DMQTCTFKFGSRMHNSDEMDFVIDKRIYSM---FESGAWDVTALSS 644
D C FGS +H+ +E++ +DK+ + M + WD + +
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFKVIKA 224
Score = 24.2 bits (50), Expect = 1.5
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 113 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHLRHANIRESESTVRIQADLQMLQN 286
++ T+L + L YD + P S +I N+T+ L + + T ++ M
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 287 WIDKRLSW 310
W D LSW
Sbjct: 99 WTDSHLSW 106
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 49.2 bits (112), Expect = 5e-08
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 522 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDV 629
Q C KFGS ++ ++D + I S +G WD+
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.8 bits (111), Expect = 6e-08
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 522 QTCTFKFGSRMHNSDEMD 575
QTC KFGS ++ ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.8 bits (111), Expect = 6e-08
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 522 QTCTFKFGSRMHNSDEMD 575
QTC KFGS ++ ++D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 327 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 494
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 495 QLDNWPNDMQTCTFKFGSRMHNSDEMD 575
++ +P D Q+C KFGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.8 bits (106), Expect = 2e-07
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.8 bits (106), Expect = 2e-07
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 512
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 513 NDMQTCTFKFGSRMHNSDEMD 575
D+QTC K GS ++ ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 46.4 bits (105), Expect = 3e-07
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 321 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 494
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 495 QLDNWPNDMQTCTFKFGSRMHNSDEMD 575
+ +P D QTC KFGS ++ ++D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 522 QTCTFKFGSRMHNSDEMDFVI 584
Q C KFGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 43.6 bits (98), Expect = 2e-06
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 327 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 494
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 495 QLDNWPNDMQTCTFKFGSRMHNSDEMD 575
++ +P D QTC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
Score = 27.1 bits (57), Expect = 0.21
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 10/96 (10%)
Frame = +2
Query: 83 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 241
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 242 ESTVRIQADLQMLQNWIDKRLSWNA---GGVGLQHL 340
T + + Q W D +L WN GGV H+
Sbjct: 66 IMTTNVWVE----QEWNDYKLKWNPDDYGGVDTLHV 97
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 42.3 bits (95), Expect = 5e-06
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 524
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 525 TCTFKFGS 548
+C GS
Sbjct: 175 SCPLILGS 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.9 bits (89), Expect = 3e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 357 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 527
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 528 CTFKFGS 548
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 33.1 bits (72), Expect = 0.003
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 116 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHANIRESESTVRIQADLQMLQN 286
N +++S ++D+LL YD PD V + + +R SE + D Q+
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMG-PISEVDMTYSMDCYFRQS 60
Query: 287 WIDKRLSWNAG 319
W+D+RL++ G
Sbjct: 61 WVDRRLAFQGG 71
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPND 518
V R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 519 MQTCTFKFGSRMHNSDEMD 575
Q C K+ S ++ +++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
Score = 23.0 bits (47), Expect = 3.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 191 IVVNLTLHLRHANIRESESTVRIQADLQMLQNWIDKRLSWNA 316
+V L+LH H I E + + + Q W D L WNA
Sbjct: 33 VVFGLSLH--HI-IDVDEKNQILTTNCWVTQIWTDHHLKWNA 71
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.7 bits (81), Expect = 3e-04
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 360 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 530
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 531 TFKFGSRMHNSDEMDFV 581
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 342 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 512
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 513 NDMQTCTFKFGSRMHNSDEMDFV 581
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 29.5 bits (63), Expect = 0.040
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 137 MIDSLLATYDRDSPP------DSKIVVNLTLHLRHANIRESESTVRIQADLQMLQNWIDK 298
++D++L YD P D VV + + +R + + + T+ L + W+D+
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSIS-KIDDVTMEYSVQLTFREQWLDE 93
Query: 299 RLSWNAGGVGLQHL 340
RL +N G L++L
Sbjct: 94 RLRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 342 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 512
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 513 NDMQTCTFKFGSRMHNSDEMDFV 581
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 27.9 bits (59), Expect = 0.12
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Frame = +2
Query: 137 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMLQNWID 295
++D++L YD P D +V + L +R A I + + +Q L + W+D
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQ--LTFREQWLD 92
Query: 296 KRLSWNAGGVGLQHL 340
+RL +N G L++L
Sbjct: 93 ERLRFNDFGGRLKYL 107
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 524
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 525 TCTFKFGSRMHNSDEMDFVID 587
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
Score = 21.8 bits (44), Expect = 8.1
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 161 YDRDSPP--DSKIVVNLTLHLRHANIRE-SESTVRIQADLQMLQNWIDKRL 304
YD+ PP D + V + H+ + E+++ AD+ Q W D RL
Sbjct: 48 YDKMRPPKKDGQATV-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDNRL 97
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 351 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 521
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 522 QTCTFKFGS 548
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.004
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 327 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 479
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 480 TPISMQLDNWPNDMQTCTFKFGS 548
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.004
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 327 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 479
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 480 TPISMQLDNWPNDMQTCTFKFGS 548
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.004
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 327 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 479
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 480 TPISMQLDNWPNDMQTCTFKFGS 548
M L +P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 31.5 bits (68), Expect = 0.010
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +3
Query: 345 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDN--W 509
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 510 PNDMQTCTFKFGSRMHNSDEM 572
P D+ CT S H S+E+
Sbjct: 167 PYDILNCTIHIASWSHGSNEI 187
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.013
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 360 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 530
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 531 TFKFGSRMHNSDEM 572
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.12
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 354 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 518
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 519 MQTCTFKFGSRMHNSDEM 572
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 581
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 581
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 581
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 429 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 581
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,838
Number of Sequences: 438
Number of extensions: 5080
Number of successful extensions: 82
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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