Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_E13
(876 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.69
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.2
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 24 1.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 4.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 4.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 4.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 4.9
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 22 6.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 6.5
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 8.5
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.69
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 82 SFPAALGRVTLHYHFRGQGGDR*PTTTES 168
+F +AL VTL+ H RG G R P S
Sbjct: 287 TFASALAVVTLNLHHRGVRGTRVPGIVRS 315
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.6 bits (51), Expect = 1.2
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +1
Query: 346 LPPHQSPPGDRQTIRTAPS*T-PLGLRIRE*NSYRRAVWIPRQTLVRPSSAPPHGA---- 510
+PP + PG T+ T PS P+ RI + ++ A + + VR A
Sbjct: 429 MPPLPNMPGSMPTMPTMPSMAGPIRRRISDKSALSLAGGLYDEGTVRRRVAVDRSGIDIN 488
Query: 511 -HLTRAEQAETHSDRSPLLRYSEGVRQSLAQRFDIQ 615
+ R + ++D P Y+ +RQS+ + D Q
Sbjct: 489 EEIQRNREFYKNADVRPPFTYASLIRQSIIESPDKQ 524
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 89 LPPSDALPSITTSEVKEAIDSLQPRKAPGSDGIRNRALKLLP 214
+ P +A + E + ID + PR PGS I+NR ++P
Sbjct: 37 MQPLEARSADLVPEPRYIID-VPPRCPPGSKFIKNRCRVIVP 77
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 2.8
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 259 DELHLSRGVERSGRYRHTQAGQ 324
D H+ RG+E G Y H + +
Sbjct: 2 DSSHVVRGIEHGGLYYHQRCSR 23
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/63 (17%), Positives = 29/63 (46%)
Frame = +3
Query: 282 RGKKRTLSAYTSRANRRTKPRVTAPSVSSRR*ANYTNGSFVNASGTSYPRIKFL*TSSLD 461
R R S R +P++ + ++ + +NY N + N + +Y ++++ + ++
Sbjct: 60 RETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIE 119
Query: 462 SAP 470
P
Sbjct: 120 QIP 122
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/63 (17%), Positives = 29/63 (46%)
Frame = +3
Query: 282 RGKKRTLSAYTSRANRRTKPRVTAPSVSSRR*ANYTNGSFVNASGTSYPRIKFL*TSSLD 461
R R S R +P++ + ++ + +NY N + N + +Y ++++ + ++
Sbjct: 60 RETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIE 119
Query: 462 SAP 470
P
Sbjct: 120 QIP 122
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/63 (17%), Positives = 29/63 (46%)
Frame = +3
Query: 282 RGKKRTLSAYTSRANRRTKPRVTAPSVSSRR*ANYTNGSFVNASGTSYPRIKFL*TSSLD 461
R R S R +P++ + ++ + +NY N + N + +Y ++++ + ++
Sbjct: 60 RETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIE 119
Query: 462 SAP 470
P
Sbjct: 120 QIP 122
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/63 (17%), Positives = 29/63 (46%)
Frame = +3
Query: 282 RGKKRTLSAYTSRANRRTKPRVTAPSVSSRR*ANYTNGSFVNASGTSYPRIKFL*TSSLD 461
R R S R +P++ + ++ + +NY N + N + +Y ++++ + ++
Sbjct: 60 RETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIE 119
Query: 462 SAP 470
P
Sbjct: 120 QIP 122
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 143 IDSLQPRKAPGSDGIRNRALKLLP 214
I + PR PGS I+NR ++P
Sbjct: 54 IIDVPPRCPPGSKFIKNRCRVIVP 77
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 358 QSPPGDRQTIRTAPS 402
QSP +QTI+T PS
Sbjct: 1286 QSPGNQQQTIQTQPS 1300
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 8.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 292 SGRYRHTQAGQTEERNRELPPHQSPPGD 375
S R + G+T+ RE+ QS P +
Sbjct: 381 SSRMENNLRGETQSNYREMEKRQSVPAN 408
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,936
Number of Sequences: 438
Number of extensions: 5975
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -