Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_E01
(918 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 62 5e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 58 8e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 53 4e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 52 6e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 52 6e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 52 1e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 51 1e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 36 5e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 36 5e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 36 5e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.015
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.034
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 30 0.034
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 9.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.5 bits (145), Expect = 5e-12
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 9/170 (5%)
Frame = +2
Query: 77 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 235
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 236 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 409
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 410 VSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGLR 559
+ G V W + + + +P D TC KF S ++ + L+
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQIDLK 176
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 59.7 bits (138), Expect = 4e-11
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Frame = +2
Query: 95 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 253
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 428 VSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGLR 559
V W + + ++ +P D TC KF S ++ + LR
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.8 bits (136), Expect = 6e-11
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 346
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 347 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTF 514
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 515 KFXSRMHNSDXMGL 556
KF S N D + L
Sbjct: 168 KFGSWTFNGDQVSL 181
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 58.4 bits (135), Expect = 8e-11
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 101 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 268
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 269 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 439
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 440 KRLDISTPISMQLDNWPNDMXTCTFKFXS 526
RL I M L+N+P D C +F S
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Frame = +2
Query: 122 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 286
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 460
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 461 PISMQLDNWPNDMXTCTFKFXSRMHNSDXMGLR 559
+ ++ +P D TC KF S ++ + LR
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLR 184
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 58.0 bits (134), Expect = 1e-10
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 286
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 451
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 452 ISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGLR 559
+ + ++ +P D +C KF S +N + L+
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLK 189
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 57.6 bits (133), Expect = 1e-10
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Frame = +2
Query: 65 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 223
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 224 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 400
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 401 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGLR 559
+A + + G V W + + ++ +P D TC KF S ++ + LR
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVDLR 176
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 55.6 bits (128), Expect = 6e-10
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Frame = +2
Query: 95 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 259
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 260 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 430
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 431 SWIKRLDISTPISMQLDN--WPNDMXTCTFKFXSRMHNSDXMGL 556
+ TP+ + D+ WP D+ CT S H S+ + L
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEIKL 189
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 6e-10
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 286
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 451
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 452 ISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGLR 559
+ S+ ++ +P D+ TC K S ++ + LR
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVDLR 184
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.4 bits (125), Expect = 1e-09
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 286
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 287 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 460
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 461 PISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
+ + +P D C KF S ++ + + L
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 209
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.4 bits (125), Expect = 1e-09
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 286
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 287 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 460
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 461 PISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
+ + +P D C KF S ++ + + L
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 209
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
G Y V++NGS ++ + + + +P D C KF S ++ + + L
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 141
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
G Y V+++GS ++ + M + +P D C KF S ++ + + L
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 52.4 bits (120), Expect = 6e-09
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
G Y V+++GS ++ + M + +P D C KF S ++ + + L
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 52.4 bits (120), Expect = 6e-09
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Frame = +2
Query: 98 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 265
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 266 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 433
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 434 WIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
+ + + +WP D C F S +H+ + + +
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNI 199
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 51.6 bits (118), Expect = 1e-08
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
G Y V+++GS ++ + + + +P D C KF S ++ + + L
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 141
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
G Y V+++GS ++ + + + +P D C KF S ++ + + L
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGL 556
G Y V+++GS ++ + + + +P D C KF S ++ + + L
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 51.2 bits (117), Expect = 1e-08
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Frame = +2
Query: 53 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 217
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 218 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD 391
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 392 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXSRMHNSDXMGLR 559
Y V NNG+ ++ + + + +P D C KF S ++ + L+
Sbjct: 124 YPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ 179
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 176 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 352
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 353 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXS 526
+L N A + VS+ G V W+ + + ++ +P D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.6 bits (108), Expect = 2e-07
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +2
Query: 110 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 274
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 275 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 445
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 446 LDISTPISMQLDNWPNDMXTC 508
L I M+L N+P D +C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 101 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 268
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 269 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 421
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 422 GSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXS 526
GS++ RL I+ M L +P D C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 101 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 268
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 269 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 421
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 422 GSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFXS 526
GS++ RL I+ M L +P D C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Frame = +2
Query: 125 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 292
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 293 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 463
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 464 ISMQLDNWPNDMXTCTFKFXS 526
M L +P D CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.9 bits (79), Expect = 5e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 98 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 262
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 263 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 433
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 434 WIKRLDISTPISMQLDNWPNDMXTCTFKFXS 526
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.9 bits (79), Expect = 5e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 98 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 262
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 263 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 433
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 434 WIKRLDISTPISMQLDNWPNDMXTCTFKFXS 526
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.9 bits (79), Expect = 5e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 98 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 262
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 263 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 433
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 434 WIKRLDISTPISMQLDNWPNDMXTCTFKFXS 526
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.015
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 176 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 349
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 350 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFX 523
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 524 S 526
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.034
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 11/145 (7%)
Frame = +2
Query: 176 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 337
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 338 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMX 502
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 503 TCTFKFXSRMHNSDXMGLRXXTXRI 577
C S ++ + LR T +
Sbjct: 129 ICPIYIESFSYHKQKLRLRWGTGAV 153
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.9 bits (64), Expect = 0.034
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMX 502
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 503 TCTFKFXSRMHNSDXM 550
C + S H +D M
Sbjct: 176 ECKLQMESLSHTTDEM 191
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 319 PSAAAPFPCVPTQS 278
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 118 GQ*CCVFAFCRTSYSTSEEKXVTR 47
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,544
Number of Sequences: 438
Number of extensions: 4588
Number of successful extensions: 74
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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