Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_D24
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 33 0.38
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 1.2
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.5
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.5
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 30 2.0
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.5
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 29 4.7
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 29 4.7
Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 6.2
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 29 6.2
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 29 6.2
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 28 8.1
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 28 8.1
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 32.7 bits (71), Expect = 0.38
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTP--Y*KEFAPGLKPPLSSXAPSAYLT 710
P+P + T+T +NP TPTT + +I +P P + P S+ AP+A +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTT--VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVN 547
Query: 711 PSSLGMAKGVRPL 749
P+S A V P+
Sbjct: 548 PTSPTTAPTVPPV 560
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXAPSAYLTPS 716
P+P + T+T +NP TPTT TS N ++P+ + + AP +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548
Query: 717 S 719
+
Sbjct: 549 T 549
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQ 294
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 520 PYASSHPPLRSRLHQPDHQIPDS 588
P +S HPPL S H +H PD+
Sbjct: 66 PTSSHHPPLNSSSHHSNHNYPDT 88
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 358
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = +3
Query: 561 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXAPSAYLTPSSLGMAKGV 740
S +S PT P SI+ +P+ ++ K S S+ + P+SL +
Sbjct: 707 SDKSQLTSLSLPTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIPPNSLHEEETQ 766
Query: 741 RPLFQ*MMNHKLAPYKSSFRH 803
PL Q M++ P S H
Sbjct: 767 TPLRQNMVHMATDPCTSQLVH 787
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = +3
Query: 561 STRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSXAPSAYLTPSSLGMAKGV 740
S +S PT P SI+ +P+ ++ K S S+ + P+SL +
Sbjct: 707 SDKSQLTSLSLPTVPTRNSIATSPVVSLCEDLKASKKSKKSRSISSSPIPPNSLHEEETQ 766
Query: 741 RPLFQ*MMNHKLAPYKSSFRH 803
PL Q M++ P S H
Sbjct: 767 TPLRQNMVHMATDPCTSQLVH 787
>Z70213-6|CAA94176.1| 167|Caenorhabditis elegans Hypothetical
protein ZK930.7 protein.
Length = 167
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 531 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLT 638
KPP+P+ T N + P++P T S PLT
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLT 136
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 528 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFA-PGLKPPLSSXAP 695
+ PP PA +A + + P + + ++NP TP + P PPLSS P
Sbjct: 166 VPPPPPAATAAVSMNGGGPGSAPGSAHSVNNNVNPGTPGSNPLSNPMSNPPLSSGPP 222
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.2
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = -2
Query: 736 PLAMPSDEGVRYADGASDDNGG-FNPG-ANSF*YGVRGLMEMDVKSGVVGVWNRGFDDRV 563
P P D G G +G PG A G GL D G G G D V
Sbjct: 133 PPGSPGDHGSPGEPGYPGPSGPPGEPGYATIGLIGPPGLAGQDGLDGAPGEPGVGGMDAV 192
Query: 562 DVAEIAGEGGLMHKGETANSNARG*RGG 479
+ + G+ G +GE N ++G RGG
Sbjct: 193 KIVSVDGKIG--RRGEAGNKGSKGSRGG 218
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 528 IKPPSPAISATSTRSSNPRFHTPTTPD-LTSISINPLTP 641
+ SPAI +T+T +++P+ T TP+ +T++ + P
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKP 304
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 472 IDSFNCDVSSSPTKVNCDWYFEARGGRKNNSLKIDK 365
++ +C V+S P K CD + R GR ++K+ +
Sbjct: 156 VEPLDCPVTSIPAKACCDIKLKPRDGRMFRAVKLQQ 191
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 472 IDSFNCDVSSSPTKVNCDWYFEARGGRKNNSLKIDK 365
++ +C V+S P K CD + R GR ++K+ +
Sbjct: 156 VEPLDCPVTSIPAKACCDIKLKPRDGRMFRAVKLQQ 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,443,155
Number of Sequences: 27780
Number of extensions: 375808
Number of successful extensions: 1234
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -