Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_D21
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0561 - 15476484-15476649,15476814-15476893,15476971-154770... 35 0.098
12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837 33 0.30
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 31 1.2
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 31 1.6
04_01_0595 + 7840842-7841345,7841518-7841748,7841919-7842017 30 2.1
09_04_0541 + 18437075-18440062 30 2.8
01_06_0285 + 28183108-28183209,28183495-28183754,28183950-281842... 29 4.9
12_01_0981 + 9931542-9931606,9931779-9933105 29 6.4
06_01_0338 - 2436779-2436954,2437257-2437484,2438526-2438682 29 6.4
05_03_0414 + 13650483-13651388,13651559-13651657 29 6.4
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 29 6.4
04_01_0600 + 7907142-7908047,7908218-7908316 29 6.4
03_05_0543 - 25404630-25405408,25405461-25405605 29 6.4
01_01_0338 + 2718212-2718251,2718519-2718607,2718997-2719050,271... 29 6.4
11_01_0307 + 2304500-2306023 28 8.5
07_01_1084 + 9885562-9885696,9885762-9886220,9886269-9886619 28 8.5
06_01_0868 - 6606913-6607000,6607516-6608010,6610313-6610761,661... 28 8.5
05_03_0589 - 15872006-15872126,15872389-15872438,15872767-158728... 28 8.5
01_06_1738 + 39570411-39571931 28 8.5
01_06_1385 + 36930377-36930681,36930769-36930895,36931515-36932360 28 8.5
>05_03_0561 -
15476484-15476649,15476814-15476893,15476971-15477030,
15477117-15477210,15477287-15477421,15477601-15477656,
15478359-15478460,15478544-15478651,15479206-15479283,
15479432-15479521,15480061-15480123
Length = 343
Score = 34.7 bits (76), Expect = 0.098
Identities = 26/126 (20%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Frame = +1
Query: 469 VRIIHESGFTNEDFKQYRPVVYSNTIQSLVAILRAMPNLGIIYGNR-------DRESDGK 627
++++ ++GF + + Y V+++N Q++ + L + + D + G+
Sbjct: 22 IKLLFQTGFDEAELRSYTSVIHANVYQTIKILYEGAKELSQVESDSSKYVISPDNQEIGE 81
Query: 628 MVFDVIQRMEDTEPVQ*GASRRDEKALGPTLAFRSALVVQRV-PLNDSAKYFLDDLDRXG 804
+ D+ R++ P+ D K L A + + + L D A+YF+++LDR
Sbjct: 82 KLSDIDGRLD--YPLLNKELVLDVKRLWQDPAIQETYLRGSILQLPDCAQYFMENLDRLA 139
Query: 805 XKDYSP 822
Y P
Sbjct: 140 EAGYVP 145
>12_01_0519 - 4102251-4102352,4102522-4103439,4104763-4104837
Length = 364
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 391 GCSKQIDR*ELEREWYSGIKRHQAIVVRIIHESGFTNEDFKQYRPVVYSNTIQSLVAILR 570
GC LE+ ++ H V++ IH+ GFT+E FK + ++ I + R
Sbjct: 283 GCDSSFPERNLEQHCSEFLQPHLLKVLKAIHKKGFTDEGFKDHALLLEKQDIDGKLGKSR 342
Query: 571 AMPNLGIIYGN 603
+ +L + N
Sbjct: 343 EVRSLTNVVKN 353
>10_08_0568 +
18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -1
Query: 699 FIAARSSSLNGFRVLHPLNHVEHHLTIAFSVSIAIDDAQVGHGTQDGDERLDRIAVDHGP 520
F+A +SS F ++ P +V L I ++++AI+DA + G L +DH
Sbjct: 107 FVADATSSKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRWRRMSGYNALWVPGMDHAG 166
Query: 519 VLFEVFICESTFMDNSN 469
+ +V + E M + N
Sbjct: 167 IATQV-VVEKRLMRDRN 182
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 342 PMLWPQAAPTPEPG-ALSPISQYALYTRP--VAPALPEPP 232
P +W QA P P+P P +Q Y P APA+P P
Sbjct: 52 PQMWGQAPPPPQPAYGQPPPAQAGYYGAPPQAAPAVPAGP 91
>04_01_0595 + 7840842-7841345,7841518-7841748,7841919-7842017
Length = 277
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 391 GCSKQIDR*ELEREWYSGIKRHQAIVVRIIHESGFTNEDFKQY 519
GC LE+ ++ H ++++IH+ GFT+E K +
Sbjct: 197 GCDSSFPERNLEQHCSEFLQAHLHKLLKVIHKKGFTDEGLKDH 239
>09_04_0541 + 18437075-18440062
Length = 995
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1
Query: 438 IPFSFKFLSINXXXXXXXXXXADWAHPISAVLPMLWPQAAPTPEPGALSPISQYALYTRP 259
IP + K L+I DW++PIS + +P+P A +S AL +
Sbjct: 17 IPIATKSLTIKTTNTNGGRGGGDWSNPISPAISFSPYLNSPSPPSSAF--VS--ALQSPY 72
Query: 258 VAPALPEPP 232
V+P L +PP
Sbjct: 73 VSPRLADPP 81
>01_06_0285 +
28183108-28183209,28183495-28183754,28183950-28184237,
28184385-28184495,28184815-28184905,28185146-28185214,
28185627-28185716,28185887-28185937,28186040-28186258,
28186371-28186490
Length = 466
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 627 DGVRRDSTDGGHGTRSVRSFSPR*KGSGADSGVQE 731
D R + ++ +GTRS SF + +GSGA G E
Sbjct: 89 DFTRTEKSEESNGTRSSNSFGSQARGSGAARGGDE 123
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 239 SHPTRY*HPIHEPNSTTFH*SYNPYYHFPP 150
S PT + H + +H YNPYYH P
Sbjct: 127 STPTHFWEGGHGAHPEPYHQPYNPYYHQEP 156
>06_01_0338 - 2436779-2436954,2437257-2437484,2438526-2438682
Length = 186
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 403 ASSSRCTLFGRLGAPHIGSSPYAMAAG----RPDSRAGRALTDLSVCALHASCRSGTTGA 236
AS + C L G PH+ SP A+ R SR GRA+ L A+ + T+G+
Sbjct: 4 ASGTSCALPGA-ARPHLAVSPSPPASSIRFCRGGSRGGRAVVSLRASVPPAAAAATTSGS 62
Query: 235 TLHDIS 218
IS
Sbjct: 63 IAPAIS 68
>05_03_0414 + 13650483-13651388,13651559-13651657
Length = 334
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 391 GCSKQIDR*ELEREWYSGIKRHQAIVVRIIHESGFTNEDFKQY 519
GC LE+ ++ H +++ IH+ GFT+E K +
Sbjct: 254 GCDSSFPERNLEQHCSEFLQAHLHKLLKAIHKKGFTDEGLKDH 296
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -1
Query: 366 AHPISAVLPMLWPQAAPTPE---PGALSPISQYALYTRPVAPALPEP 235
AH S P P AP PE PG P+ ++ VAP LP P
Sbjct: 38 AHRHSLPAPAPAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPPLPPP 84
>04_01_0600 + 7907142-7908047,7908218-7908316
Length = 334
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 391 GCSKQIDR*ELEREWYSGIKRHQAIVVRIIHESGFTNEDFKQY 519
GC LE+ ++ H +++ IH+ GFT+E K +
Sbjct: 254 GCDSSFPERNLEQHCSEFLQAHLHKLLKAIHKKGFTDEGLKDH 296
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 366 AHPISAV-LPMLWPQAAPTPEPGALSP-ISQYALYTRPVAPALPEP 235
A P+ V P P+ AP P P L+P +SQ L R AP +PEP
Sbjct: 143 AAPLPGVRTPPSPPRRAPAPAPAPLTPALSQRFLAERRPAP-VPEP 187
>01_01_0338 +
2718212-2718251,2718519-2718607,2718997-2719050,
2719201-2719271,2719375-2719456,2719561-2719657,
2719752-2719873
Length = 184
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Frame = +2
Query: 689 AAMKRLWGRLWRS-GVLWSFNEYHS---TTPLNISWT 787
A + ++ RL+ + G+LWSF E HS T L ISW+
Sbjct: 22 ATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWS 58
>11_01_0307 + 2304500-2306023
Length = 507
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 576 AQLGHHLWQ*RPRKRW*DGVRRDSTDGG 659
A +GH LWQ R R+R G+ ++ T G
Sbjct: 463 AYVGHRLWQRRRRRRRAGGMEQELTSSG 490
>07_01_1084 + 9885562-9885696,9885762-9886220,9886269-9886619
Length = 314
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 331 AAGRPDSRAGRALTDLSVCALHASCRSGTTGA 236
AAGR +R+GR TDL+V A TGA
Sbjct: 62 AAGRHPARSGRGGTDLAVAAAATGATPLATGA 93
>06_01_0868 -
6606913-6607000,6607516-6608010,6610313-6610761,
6610863-6610979,6611892-6612863
Length = 706
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 297 ARPARESGRPAAIA*GELPIWGAPSRPKSVQRLLEAN 407
A PA + RPAA+A + G+PS P SV++ N
Sbjct: 77 ASPAAPALRPAAVADADGASKGSPSTPASVKKTSRLN 113
>05_03_0589 -
15872006-15872126,15872389-15872438,15872767-15872835,
15873027-15873128,15873874-15873951,15874100-15874189,
15874730-15874822
Length = 200
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 757 LNDSAKYFLDDLDRXGXKDYSP 822
L D A+YF+++LDR DY P
Sbjct: 98 LPDCAQYFMENLDRLAEADYVP 119
>01_06_1738 + 39570411-39571931
Length = 506
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 703 PFHRGEKLLTERVPCPPSVESRRTPSYHRFLGLYCHR*CP 584
P HR LL R+ ESRR PS R L L R CP
Sbjct: 110 PDHRLTSLLASRL-----AESRRLPSLRRLLELVLFRPCP 144
>01_06_1385 + 36930377-36930681,36930769-36930895,36931515-36932360
Length = 425
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Frame = -1
Query: 306 PGALSPISQY-------ALYTRPVAPALPEPPYTIL 220
PG LSP+ +Y A+ T P PA+P PP ++
Sbjct: 211 PGQLSPLEEYIRSQYPSAVETTPPPPAVPAPPSDVI 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,615,030
Number of Sequences: 37544
Number of extensions: 551796
Number of successful extensions: 1980
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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