Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_D21
         (873 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   8.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   8.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 222 ISCRVAPVVPERQDACRAHTERSVR 296
           ISCR   V  E   ACR   E  +R
Sbjct: 627 ISCRQGTVPDETHSACRDIPEEFLR 651


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 510 EVFICESTFMDNSNNN 463
           E  IC+  F+D S NN
Sbjct: 336 EELICDKRFVDESANN 351


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 510 EVFICESTFMDNSNNN 463
           E  IC+  F+D S NN
Sbjct: 351 EELICDKRFVDESANN 366


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 767 PLNISWTTSTG 799
           PLNI W+T+ G
Sbjct: 59  PLNIDWSTADG 69


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 767 PLNISWTTSTG 799
           PLNI W+T+ G
Sbjct: 59  PLNIDWSTADG 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,620
Number of Sequences: 438
Number of extensions: 5875
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)