Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_C13
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254867-1|AAF77184.1| 1482|Drosophila melanogaster SNS protein.       34   0.22 
AE013599-717|AAF59040.2| 1479|Drosophila melanogaster CG33141-PA...    34   0.22 
AE013599-716|ABI31083.1| 1542|Drosophila melanogaster CG33141-PB...    34   0.22 
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.2  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.2  

>AF254867-1|AAF77184.1| 1482|Drosophila melanogaster SNS protein.
          Length = 1482

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 2/180 (1%)
 Frame = +1

Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
           L++    L   LT     ++++ V   P    +I GY +  ++   +V      S     
Sbjct: 455 LVVICHGLNMQLTENVVSTHTINVL-YPPAPPLISGYMEGQIIPAGSVQKLLCVSSGGNP 513

Query: 421 TVDLCWTTADVTVEGVNVLATPS-SSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTN 597
              L W   D  +  V   A  S S+ ITI      +QA   C+         + IP   
Sbjct: 514 LATLTWYKNDKRINSVIRAADKSVSAEITILANVSDNQAQYRCEASNS----ATEIPLFQ 569

Query: 598 HPRLNIHFH-QSPERRTKXSSRRG*ASVVIXXSISVXHPPRHWAWLKGFAPLFQVNDESK 774
              L++HF  ++ + R +    R      I    S  +PP   +W K   P+  +N+ SK
Sbjct: 570 STTLSVHFAPETVKIRIEPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSK 629


>AE013599-717|AAF59040.2| 1479|Drosophila melanogaster CG33141-PA,
           isoform A protein.
          Length = 1479

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 2/180 (1%)
 Frame = +1

Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
           L++    L   LT     ++++ V   P    +I GY +  ++   +V      S     
Sbjct: 453 LVVICHGLNMQLTENVVSTHTINVL-YPPAPPLISGYMEGQIIPAGSVQKLLCVSSGGNP 511

Query: 421 TVDLCWTTADVTVEGVNVLATPS-SSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTN 597
              L W   D  +  V   A  S S+ ITI      +QA   C+         + IP   
Sbjct: 512 LATLTWYKNDKRINSVIRAADKSVSAEITILANVSDNQAQYRCEASNS----ATEIPLFQ 567

Query: 598 HPRLNIHFH-QSPERRTKXSSRRG*ASVVIXXSISVXHPPRHWAWLKGFAPLFQVNDESK 774
              L++HF  ++ + R +    R      I    S  +PP   +W K   P+  +N+ SK
Sbjct: 568 STTLSVHFAPETVKIRIEPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSK 627


>AE013599-716|ABI31083.1| 1542|Drosophila melanogaster CG33141-PB,
           isoform B protein.
          Length = 1542

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 2/180 (1%)
 Frame = +1

Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
           L++    L   LT     ++++ V   P    +I GY +  ++   +V      S     
Sbjct: 453 LVVICHGLNMQLTENVVSTHTINVL-YPPAPPLISGYMEGQIIPAGSVQKLLCVSSGGNP 511

Query: 421 TVDLCWTTADVTVEGVNVLATPS-SSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTN 597
              L W   D  +  V   A  S S+ ITI      +QA   C+         + IP   
Sbjct: 512 LATLTWYKNDKRINSVIRAADKSVSAEITILANVSDNQAQYRCEASNS----ATEIPLFQ 567

Query: 598 HPRLNIHFH-QSPERRTKXSSRRG*ASVVIXXSISVXHPPRHWAWLKGFAPLFQVNDESK 774
              L++HF  ++ + R +    R      I    S  +PP   +W K   P+  +N+ SK
Sbjct: 568 STTLSVHFAPETVKIRIEPEELRPGMEATIICDSSSSNPPAKLSWWKDGIPIEGINNTSK 627


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,501,495
Number of Sequences: 53049
Number of extensions: 750879
Number of successful extensions: 2531
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2530
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)