Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_C05
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical pr... 31 1.5
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.5
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.5
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.4
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 4.5
AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical... 29 5.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.8
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 28 7.8
AF040650-6|AAB95007.2| 325|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical
protein F53H2.3 protein.
Length = 667
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 545 VLATPSSSRITIGGLALMHQATLPAISATSTRSSNPDSIHQPXPDLTSISINPLTP 712
VLA +R A++H + L + SA S R P SIH LTSIS + P
Sbjct: 44 VLAENCKTRF-FKAFAILHFSCLLSESAQSHRDHGPSSIHWTKGQLTSISYSLSVP 98
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 295 GTVSSTFDHPFSTPVLRSYWHRNQ 366
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 295 GTVSSTFDHPFSTPVLRSYWHRNQ 366
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 298 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 462
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 463 SFRP*PQNTSHS 498
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 298 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 462
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 463 SFRP*PQNTSHS 498
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 298 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 462
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 463 SFRP*PQNTSHS 498
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 387 NHYRTPPPS*KATATRILSILRLSFFLPPLASKYQSQLTFVGLLLTSQLKESMC 548
NHY +PP A+A LS +RL+ P+ S ++ F+ + +L+ +C
Sbjct: 94 NHYESPPSLSSASAASCLSRIRLAATFDPIISAKINR--FIDSMRIDRLRAYVC 145
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 326 FQRLYFDLTGTETKSNSVTVQSLPNASSIIKGYRD 430
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical
protein Y111B2A.24 protein.
Length = 457
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +2
Query: 560 SSSRITIGGLALMHQATLPAISATSTRSSNPDSIHQPXPDLTSI---SINPLTPYXXEFA 730
SSSR + AT + A+++ S+ P IH+ +TSI S + TP
Sbjct: 111 SSSRCRAHSSQSLGSATKDSARASASSSAAPSEIHKRSQSVTSIPAASTSTTTP-----T 165
Query: 731 PGLKPRCIR--GHQXXSPPRPGHG 796
P L+P ++ +PPRP G
Sbjct: 166 PILRPSTLQIPAQSYVAPPRPRIG 189
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -3
Query: 162 EEKALTKEGMAEAAETX*RHNFFHE*VIKKSSCKTPSTEGSEKRGAKRVRAN 7
+E+ + G E+ + H+ + E +K S K+P T G+E G++ + A+
Sbjct: 11708 QEEFASTTGDIESIVSEKGHDTYSEKTVKSSKKKSPQTAGAEYGGSESLNAS 11759
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -3
Query: 162 EEKALTKEGMAEAAETX*RHNFFHE*VIKKSSCKTPSTEGSEKRGAKRVRAN 7
+E+ + G E+ + H+ + E +K S K+P T G+E G++ + A+
Sbjct: 11708 QEEFASTTGDIESIVSEKGHDTYSEKTVKSSKKKSPQTAGAEYGGSESLNAS 11759
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 515 TADVTVEGVNVLATPSSSRITIGGLALMHQATLPAISATSTRSS--NPDSIHQPXPDLT 685
T +++V+ + + T +R+T+ + + T+P S++ST S D + DLT
Sbjct: 194 TTNISVDVIKLAPTTKRTRVTVPDRPKLMETTVPVTSSSSTSSEMIEVDGESETQEDLT 252
>AF040650-6|AAB95007.2| 325|Caenorhabditis elegans Hypothetical
protein T04B8.1 protein.
Length = 325
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +2
Query: 674 PDLTSISINPLTPYXXEFAPGLKPRCIRGHQXXSPPRPGHGKG 802
PD TS SIN LT Y E GLK +CI P G G
Sbjct: 204 PD-TSTSINQLTIYAGEHRVGLK-KCIMFENGRQVPNTSTGGG 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,179,066
Number of Sequences: 27780
Number of extensions: 385239
Number of successful extensions: 1040
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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