Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_C03
(902 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 64 2e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 7e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 2e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 58 1e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 55 1e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 53 4e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 4e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 49 5e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 3e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 2e-05
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 31 0.019
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.18
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.18
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 63.7 bits (148), Expect = 2e-12
Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 253
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 254 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 427
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 428 VSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHN 559
+ G V W + + +P D QTC KFGS ++
Sbjct: 127 LHYTGKVLWTPP-AIFKSSCEIDVRYFPFDQQTCFMKFGSWTYD 169
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 62.1 bits (144), Expect = 7e-12
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 271
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 445
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 446 VSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHN 559
V W K + ++ +P D QTC KFGS ++
Sbjct: 137 VEW-KPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYD 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.9 bits (141), Expect = 2e-11
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 298
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 299 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWDKA 463
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW K
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW-KP 150
Query: 464 LGTLALPXSMQLDXWPTDMQTCTFKFGSXMHN 559
+ ++ +P D Q+C KFGS +N
Sbjct: 151 PAIYKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V++NGS + G + + +P D Q C KFGS ++ + + V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPP-GIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V++NGS + G + + +P D Q C KFGS ++ + + V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPP-GIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 59.7 bits (138), Expect = 4e-11
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V++NGS + G + + +P D Q C KFGS ++ + + V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPP-GIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.7 bits (138), Expect = 4e-11
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWDKALGTLA 478
W E+G L V S+ +WRPD+VL NA A +A + + G V W K
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW-KPPAIYK 150
Query: 479 LPXSMQLDXWPTDMQTCTFKFGSXMHN 559
+ ++ +P D QTC KFGS ++
Sbjct: 151 SSCEIDVEYFPFDEQTCVLKFGSWTYD 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 59.3 bits (137), Expect = 5e-11
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 244
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 245 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 418
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 419 ---RARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHN 559
+A + + G V W K + ++ +P D QTC KFGS ++
Sbjct: 121 IMTKAILHHTGKVVW-KPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYD 169
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V+++GS + G M + +P D Q C KFGS ++ + + V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPP-GIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V+++GS + G M + +P D Q C KFGS ++ + + V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPP-GIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.4 bits (135), Expect = 8e-11
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCT 532
PD+VL N A G+Y +R + + NG V W ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPP-AIYQSSCTIDVTYFPFDQQTCI 166
Query: 533 FKFGSXMHNXDXMXFVI 583
KFGS N D + +
Sbjct: 167 MKFGSWTFNGDQVSLAL 183
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V+++GS + G + + +P D Q C KFGS ++ + + V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPP-GIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V+++GS + G + + +P D Q C KFGS ++ + + V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPP-GIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 57.6 bits (133), Expect = 1e-10
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWD 457
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 458 KALGTLALPXSMQLDXWPTDMQTCTFKFGS 547
L T+ M L+ +P D Q C +FGS
Sbjct: 122 SRL-TIKAGCPMNLENFPMDTQRCPLQFGS 150
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFVI 583
G Y V+++GS + G + + +P D Q C KFGS ++ + + V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPP-GIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWDKALG 469
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPP-A 147
Query: 470 TLALPXSMQLDXWPTDMQTCTFKFGSXMHN 559
S+ ++ +P D+QTC K GS ++
Sbjct: 148 VYKSSCSIDVEFFPYDVQTCVLKLGSWTYD 177
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.8 bits (126), Expect = 1e-09
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 430
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 431 SNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHN 559
NNG+ + G + + +P D Q C KFGS ++
Sbjct: 131 KNNGTCLYVPP-GIFKSTCKIDITWFPFDDQRCEMKFGSWTYD 172
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.8 bits (121), Expect = 4e-09
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 448
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 449 SWDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMH 556
T WP D+ CT S H
Sbjct: 148 LC-VPFTTYTPVCEYDHTWWPYDILNCTIHIASWSH 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 52.8 bits (121), Expect = 4e-09
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 283
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 284 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 451
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 452 WDKALGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXD 565
++ +A + WP D C FGS +H+ +
Sbjct: 159 CVPSVKHVA-KCATDFSSWPYDTHRCRINFGSWVHSGE 195
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 370
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 371 VVLLNAAATTAGDYALRAR--VSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFG 544
+L N A + VS+ G V W + G + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW-LSHGIFRSSCDIDVEFFPFDEQRCVLKWA 150
Query: 545 SXMHN 559
S ++
Sbjct: 151 SWTYD 155
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.2 bits (112), Expect = 5e-08
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWDKA 463
L +N G T L + R+W PD+ N + + R+ NGSV +
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFV 580
+ +L L M L +P D Q C+ + S D + F+
Sbjct: 154 I-SLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.8 bits (106), Expect = 3e-07
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 292
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 293 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWDKA 463
RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 464 LGTLALPXSMQLDXWPTDMQTCTFKFGS 547
L T+ M+L +P D Q+C GS
Sbjct: 156 L-TIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 4e-07
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWDKA 463
L +N G T L + R+W PD+ N + + R+ NGSV +
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 464 LGTLALPXSMQLDXWPTDMQTCTFKFGSXMHNXDXMXFV 580
+ +L L M L +P D Q C+ + S D + F+
Sbjct: 154 I-SLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.7 bits (91), Expect = 2e-05
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +2
Query: 233 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 412
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 413 ALR---ARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQTCTFKFGS 547
R R+S +GSV++ T L M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRF-TTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.019
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWDKALGTLALPXSMQLDXWPTDM 520
+ +WRPD NA + T + + + ++ + L TL L +M +P D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKL-TLKLSCAMNFLIYPHDT 174
Query: 521 QTCTFKFGSXMHNXDXMXF 577
Q C + S H D M F
Sbjct: 175 QECKLQMESLSHTTDEMIF 193
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.5 bits (58), Expect = 0.18
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 356 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWDKALGTLALPXSMQLDXWPTDMQT 526
+W P V + N ++A T + + + +G V + L L ++L+ +P D+Q
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQA-TLNCGLRLEKFPFDVQE 155
Query: 527 CTFKFGSXMHN 559
C F S HN
Sbjct: 156 CPLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.18
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
Frame = +2
Query: 194 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 355
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 356 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWDKALGTLALPXSMQLDXWPTDM 520
LW+PD LNA + AL + S+ N +V + + + + M+ +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAI-IACQMEFQLYPMDI 127
Query: 521 QTC 529
Q C
Sbjct: 128 QIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = -3
Query: 729 GGPFLRHXPXE-PWPPXXXLPPGPGXXPPP 643
G P + P + P P PP P PPP
Sbjct: 19 GAPGPQPSPHQSPQAPQRGSPPNPSQGPPP 48
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 337 PSAAAPLPCVPTQS 296
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,534
Number of Sequences: 438
Number of extensions: 5023
Number of successful extensions: 84
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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