Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_B22
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 40 0.003
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 35 0.068
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 35 0.068
Z73427-8|CAA97804.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 33 0.27
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 32 0.63
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 32 0.63
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 32 0.63
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 32 0.63
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 32 0.63
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 31 1.1
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 31 1.1
Z83111-6|CAB05529.2| 316|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF016675-7|AAB66135.1| 387|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 549 ITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTHCIFPAVWKEA 728
IT+ E+ + + P A G DGI ++ LP+ + LA + N +++ I P WK+A
Sbjct: 328 ITSIELHNMAIKMSPSAAIGPDGIAQIHIRKLPMCGYSFLAYLYNVSLSTNIIPDKWKKA 387
Query: 729 DVIGI 743
+VI I
Sbjct: 388 NVIMI 392
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 35.1 bits (77), Expect = 0.068
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 462 QHADPEHTELVDREVE--RRASLPPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRAL 635
Q + +TEL V + +S+P + PP +E+R + + KA G D I L
Sbjct: 516 QEIEKFYTELFKSAVSNSQTSSIPATATPPPFLPEEIRHVLRSFPNGKAAGQDKISADFL 575
Query: 636 KLLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGILSGNDKK 764
K +I ++ N + P WK + I D++
Sbjct: 576 KSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRE 618
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 35.1 bits (77), Expect = 0.068
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 462 QHADPEHTELVDREVE--RRASLPPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRAL 635
Q + +TEL V + +S+P + PP +E+R + + KA G D I L
Sbjct: 255 QEIEKFYTELFKSAVSNSQTSSIPATATPPPFLPEEIRHVLRSFPNGKAAGQDKISADFL 314
Query: 636 KLLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGILSGNDKK 764
K +I ++ N + P WK + I D++
Sbjct: 315 KSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRE 357
>Z73427-8|CAA97804.1| 302|Caenorhabditis elegans Hypothetical
protein F58B3.8 protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 857 ILTIDFLELSVQFKRSKTVVISISENYRRXKFLVVAAKYTDNVRF 723
I+ +LEL +Q +T +++IS N+R K +V K NV F
Sbjct: 18 IICSGYLELHIQSPHIQTAIVNISSNFRTEKSKIVHLKLKSNVPF 62
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 525 PP--SDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRALKLLPVQLIAMLATILNAAMTH 698
PP ++ LPP E+R AI++ KA GSD I LK +I ++ N +
Sbjct: 386 PPIMAEPLPPFLFGEIRAAINSFPNGKAAGSDKITADFLKSCGDYVIRLITGRFNRYLES 445
Query: 699 CIFPAVWKEADVIGILSGND 758
P WK + I D
Sbjct: 446 GNIPKDWKTSKTTLIFKKGD 465
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 462 QHADPEHTELVDREVE--RRASLPPSDALPPITTDEVRDAIHNLQPRKAPGSDGIHNRAL 635
Q + +TE V + +S+P + PP +++R A+ + KA G D I L
Sbjct: 345 QEIEKFYTEFFKSAVSNSQASSIPTTATPPPFLPEKIRYALRSFPNGKAAGQDKISADFL 404
Query: 636 KLLPVQLIAMLATILNAAMTHCIFPAVWKEADVIGILSGNDKK 764
K +I ++ N + P WK + I D++
Sbjct: 405 KSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDRE 447
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 570 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 625
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 626 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 683
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 684 ISPLHCPNNIP 694
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 601 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 656
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 657 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 714
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 715 ISPLHCPNNIP 725
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 606 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 661
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 662 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 719
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 720 ISPLHCPNNIP 730
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 570 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 625
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 626 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 683
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 684 ISPLHCPNNIP 694
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 601 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 656
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 657 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 714
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 715 ISPLHCPNNIP 725
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 606 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 661
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 662 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 719
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 720 ISPLHCPNNIP 730
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 606 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 661
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 662 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 719
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 720 ISPLHCPNNIP 730
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 31.9 bits (69), Expect = 0.63
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Frame = +3
Query: 3 LDLSPEDTVESINIITDHISSAIIRS--SKEVDVEDSFHRIRLSPDLRNLLRVRNAAIRA 176
L L+P + S I+TDH + ++ S + + + H + D RN+ R+ + I
Sbjct: 570 LQLAPH--LRSFPIVTDHENKILLGSVAKRYLTMLLRRHVLVNQQDSRNIGRMTPSEI-- 625
Query: 177 YDRLPTHSNRIRMRRLQREVHSRLSDARNDNWHSYLEQLAPSHQAYWRLARTLKSETIAT 356
++ + S R+ R R +S S R ++ APS Q + RT+ T+ +
Sbjct: 626 FNTIRRTSMRLSRRSPSRRSNS--SQTRENSVPETARSDAPSDQVEFVSERTISGNTLLS 683
Query: 357 MPPLVRPSGQP 389
+ PL P+ P
Sbjct: 684 ISPLHCPNNIP 694
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 745 SIPITSASFHTAGKMQCVIAAFKIVANIAISWT 647
S + +A+F T K+ C++ AFK + +I IS T
Sbjct: 22 STQVANATFLTISKLICLVVAFKFIKHIPISTT 54
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 745 SIPITSASFHTAGKMQCVIAAFKIVANIAISWT 647
S + +A+F T K+ C++ AFK + +I IS T
Sbjct: 22 STQVANATFLTISKLICLVVAFKFIKHIPISTT 54
>Z83111-6|CAB05529.2| 316|Caenorhabditis elegans Hypothetical
protein F57G8.8 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 459 CWWCTALAVHRPAAQPCHRH 400
C W ++A+H PA CH H
Sbjct: 119 CHWLISIALHMPAVLICHAH 138
>AF016675-7|AAB66135.1| 387|Caenorhabditis elegans Hypothetical
protein T27B7.3 protein.
Length = 387
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 558 RW*WGVTRPRAAGKLCARPPCRLTRCV 478
+W + + GK+C PCRL +CV
Sbjct: 39 KWIFKKCKKEDEGKICTCKPCRLQKCV 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,265,200
Number of Sequences: 27780
Number of extensions: 396482
Number of successful extensions: 1150
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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