Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_B17
         (799 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA...   189   3e-48
AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB...   187   2e-47
AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p pro...   182   7e-46

>AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA,
           isoform A protein.
          Length = 218

 Score =  189 bits (461), Expect = 3e-48
 Identities = 87/143 (60%), Positives = 100/143 (69%), Gaps = 6/143 (4%)
 Frame = +1

Query: 301 ATPAVPQVPLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGWF 462
           A+  V  VPLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGWF
Sbjct: 2   ASATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGWF 61

Query: 463 SDSFIASFVLVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFXXXXXXXXXXX 642
           SDSFI SFV V+L LSADFWTVKNISGRLLVGLRWWNYVDD+G SHWVF           
Sbjct: 62  SDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSRVNKNE 121

Query: 643 XXXFWXGLTLCPLGLVPFFIFCL 711
              FW GL LCP+    FF+F L
Sbjct: 122 QRIFWLGLILCPVFWGLFFLFAL 144


>AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB,
           isoform B protein.
          Length = 215

 Score =  187 bits (455), Expect = 2e-47
 Identities = 85/136 (62%), Positives = 97/136 (71%), Gaps = 6/136 (4%)
 Frame = +1

Query: 322 VPLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIAS 483
           VPLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGWFSDSFI S
Sbjct: 6   VPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFITS 65

Query: 484 FVLVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFXXXXXXXXXXXXXXFWXG 663
           FV V+L LSADFWTVKNISGRLLVGLRWWNYVDD+G SHWVF              FW G
Sbjct: 66  FVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSRVNKNEQRIFWLG 125

Query: 664 LTLCPLGLVPFFIFCL 711
           L LCP+    FF+F L
Sbjct: 126 LILCPVFWGLFFLFAL 141


>AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p
           protein.
          Length = 223

 Score =  182 bits (442), Expect = 7e-46
 Identities = 87/148 (58%), Positives = 100/148 (67%), Gaps = 11/148 (7%)
 Frame = +1

Query: 301 ATPAVPQVPLLDDDTIAFGEEDN------ANKQFVHPYIVFFHLVFRCSAIIVYILCGWF 462
           A+  V  VPLLDDDTI FGEED       A +++ HPY+ FFHL FR +AI++Y+ CGWF
Sbjct: 2   ASATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGWF 61

Query: 463 SDSFIASFVLVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVF-----XXXXXX 627
           SDSFI SFV V+L LSADFWTVKNISGRLLVGLRWWNYVDD+G SHWVF           
Sbjct: 62  SDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQSR 121

Query: 628 XXXXXXXXFWXGLTLCPLGLVPFFIFCL 711
                   FW GL LCP+    FF+F L
Sbjct: 122 VNKNEQRIFWLGLILCPVFWGLFFLFAL 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,005,889
Number of Sequences: 53049
Number of extensions: 669032
Number of successful extensions: 1360
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)