Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_B17
         (799 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-12|ABJ99069.1|  205|Caenorhabditis elegans Hypothetical p...   105   4e-23
U58755-11|AAB00701.1|  247|Caenorhabditis elegans Hypothetical p...   105   4e-23
AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    28   6.7  

>U58755-12|ABJ99069.1|  205|Caenorhabditis elegans Hypothetical
           protein C34D4.4b protein.
          Length = 205

 Score =  105 bits (252), Expect = 4e-23
 Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = +1

Query: 376 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 555
           + F  P IV  HL F+ +A+  Y    +F++SFI  F++++ LLS DFWTVKNI+GRLLV
Sbjct: 26  QMFGKPTIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLV 85

Query: 556 GLRWWNYVDDNGKSHWVF--XXXXXXXXXXXXXXFWXGLTLCPLGLVPFFI 702
           GLRWWN+VD +G +HW F                FW GL + P   + FF+
Sbjct: 86  GLRWWNFVDADGNNHWKFESAKDMTRFATIDRRVFWLGLVVGPAAWI-FFV 135


>U58755-11|AAB00701.1|  247|Caenorhabditis elegans Hypothetical
           protein C34D4.4a protein.
          Length = 247

 Score =  105 bits (252), Expect = 4e-23
 Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = +1

Query: 376 KQFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLV 555
           + F  P IV  HL F+ +A+  Y    +F++SFI  F++++ LLS DFWTVKNI+GRLLV
Sbjct: 68  QMFGKPTIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLSMDFWTVKNITGRLLV 127

Query: 556 GLRWWNYVDDNGKSHWVF--XXXXXXXXXXXXXXFWXGLTLCPLGLVPFFI 702
           GLRWWN+VD +G +HW F                FW GL + P   + FF+
Sbjct: 128 GLRWWNFVDADGNNHWKFESAKDMTRFATIDRRVFWLGLVVGPAAWI-FFV 177


>AF038605-2|AAB92020.1|  698|Caenorhabditis elegans Hypothetical
           protein C02B10.5 protein.
          Length = 698

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -3

Query: 560 SPTSNRPLIFLTVQKSADSSRMTNTKLAMNESENHPHRMYTIIAEHRNTRWKNTM 396
           +P SN  L     ++  +   M   K+  +E++N+P R   ++A   N R  NT+
Sbjct: 286 NPPSNASLKRRATEEFGNDGPMKQAKIEGSENDNNPMRKLEMMANSSNFRGGNTI 340


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 495  HSTAVCRLLDCQEY*WSVTSWT*VVELCGRQRQVALGVRXPSEPGQQ 635
            +S A C  + C  Y W+VT W+   + C R ++    V   S  G++
Sbjct: 1740 NSVANCFPVACPAYRWNVTPWSKCKDECARGQKQTRRVHCISTSGKR 1786


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 495  HSTAVCRLLDCQEY*WSVTSWT*VVELCGRQRQVALGVRXPSEPGQQ 635
            +S A C  + C  Y W+VT W+   + C R ++    V   S  G++
Sbjct: 1740 NSVANCFPVACPAYRWNVTPWSKCKDECARGQKQTRRVHCISTSGKR 1786


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,037,227
Number of Sequences: 27780
Number of extensions: 348314
Number of successful extensions: 789
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)