Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_B11
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 0.19
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 0.19
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 0.20
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 33 0.33
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 0.77
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 0.77
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 25 1.2
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 25 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 1.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 1.7
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 27 2.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 2.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 2.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 2.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 24 4.5
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 24 4.5
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 5.4
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 5.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 7.2
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 28 7.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 9.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 9.5
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 28 9.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 9.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect(2) = 0.19
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG PPPPPPPP
Sbjct: 749 GGLPPISGGPPPPPPPP 765
Score = 26.6 bits (56), Expect(2) = 0.25
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 695 PPPPPPPP 672
PPPPPPPP
Sbjct: 769 PPPPPPPP 776
Score = 25.0 bits (52), Expect(2) = 0.25
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG PPPPPPP
Sbjct: 733 GGLPPITGGPPPPPPP 748
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP 763
Score = 24.2 bits (50), Expect(2) = 0.19
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 695 PPPPPPP 675
PPPPPPP
Sbjct: 726 PPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect(2) = 0.19
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG PPPPPPPP
Sbjct: 749 GGLPPISGGPPPPPPPP 765
Score = 26.6 bits (56), Expect(2) = 0.25
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 695 PPPPPPPP 672
PPPPPPPP
Sbjct: 769 PPPPPPPP 776
Score = 25.0 bits (52), Expect(2) = 0.25
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG PPPPPPP
Sbjct: 733 GGLPPITGGPPPPPPP 748
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP 763
Score = 24.2 bits (50), Expect(2) = 0.19
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 695 PPPPPPP 675
PPPPPPP
Sbjct: 726 PPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect(2) = 0.20
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG PPPPPPPP
Sbjct: 332 GGLPPISGGPPPPPPPP 348
Score = 26.6 bits (56), Expect(2) = 0.26
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 695 PPPPPPPP 672
PPPPPPPP
Sbjct: 352 PPPPPPPP 359
Score = 25.0 bits (52), Expect(2) = 0.26
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG PPPPPPP
Sbjct: 316 GGLPPITGGPPPPPPP 331
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPP 346
Score = 24.2 bits (50), Expect(2) = 0.20
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPP 373
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 695 PPPPPPP 675
PPPPPPP
Sbjct: 309 PPPPPPP 315
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 673 GGGGGGGGXXXXPPXPP 723
GGGGGGGG PP PP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
GG GG PPPPPP
Sbjct: 36 GGGGGGCCAPPPPPP 50
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG GG PPPPPP
Sbjct: 35 GGGGGGGCCAPPPPPP 50
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG GG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 719 GXGGXXXXPPPPPPPP 672
G GG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG GG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 719 GXGGXXXXPPPPPPPP 672
G GG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG GG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 719 GXGGXXXXPPPPPPPP 672
G GG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG GG PPPPPP P
Sbjct: 22 GGGGGCGCAPPPPPPSP 38
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPPXXXXXXXXXXXXGPP 627
GG GG PPPPPP P PP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPPXXXXXXXXXXXXGPP 627
GG GG PPPPPP P PP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 25.0 bits (52), Expect(2) = 1.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
GG G PPPPPP
Sbjct: 762 GGPVGVGVPPPPPPP 776
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPP 791
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 25.0 bits (52), Expect(2) = 1.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
GG G PPPPPP
Sbjct: 762 GGPVGVGVPPPPPPP 776
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 692 PPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPP PP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPP 791
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.1 bits (57), Expect(2) = 1.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 695 PPPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPPP PP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPP 329
Score = 23.0 bits (47), Expect(3) = 4.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 719 GXGGXXXXPPPPPP 678
G G PPPPPP
Sbjct: 319 GPPGMPGMPPPPPP 332
Score = 23.0 bits (47), Expect(3) = 5.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 719 GXGGXXXXPPPPPP 678
G G PPPPPP
Sbjct: 336 GPPGMGGMPPPPPP 349
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 710 GXXXXPPPPPP 678
G PPPPPP
Sbjct: 304 GMWPPPPPPPP 314
Score = 21.4 bits (43), Expect(3) = 4.6
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = -1
Query: 689 PPPPPPXXXXXXXXXXXXGPP 627
PPPPPP PP
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPP 378
Score = 21.0 bits (42), Expect(3) = 4.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 692 PPPPPP 675
PPPPPP
Sbjct: 344 PPPPPP 349
Score = 21.0 bits (42), Expect(3) = 5.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 692 PPPPPP 675
PPPPPP
Sbjct: 358 PPPPPP 363
Score = 21.0 bits (42), Expect(3) = 5.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 689 PPPPPP 672
PPPPPP
Sbjct: 392 PPPPPP 397
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.1 bits (57), Expect(2) = 1.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 695 PPPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPPP PP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPP 319
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 710 GXXXXPPPPPP 678
G PPPPPP
Sbjct: 294 GMWPPPPPPPP 304
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 676 GGGGGGGXXXXPPXPP 723
GGGGGGG PP PP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
GG GG PPPPPP
Sbjct: 32 GGGGGGDAAPPPPPP 46
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG GG PPPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 26.6 bits (56), Expect(2) = 2.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 695 PPPPPPPP 672
PPPPPPPP
Sbjct: 589 PPPPPPPP 596
Score = 21.8 bits (44), Expect(2) = 2.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 710 GXXXXPPPPPP 678
G PPPPPP
Sbjct: 574 GAPPPPPPPPP 584
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -1
Query: 713 GGXXXXPPPPPPPPXXXXXXXXXXXXGPP 627
G PPPPPPPP PP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPPPP 177
Score = 27.1 bits (57), Expect(2) = 2.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 695 PPPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPPP PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPP 178
Score = 21.4 bits (43), Expect(2) = 2.3
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
G PPPPPP
Sbjct: 149 GATSSAPPPPPPPPP 163
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -1
Query: 713 GGXXXXPPPPPPPPXXXXXXXXXXXXGPP 627
G PPPPPPPP PP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPPPP 177
Score = 27.1 bits (57), Expect(2) = 2.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 695 PPPPPPPPXXXXXXXXXXXXGPP 627
PPPPPPPP PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPPP 178
Score = 21.4 bits (43), Expect(2) = 2.3
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
G PPPPPP
Sbjct: 149 GATSSAPPPPPPPPP 163
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 713 GGXXXXPPPPPPP 675
G PPPPPPP
Sbjct: 116 GDHEASPPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 692 PPPPPPP 672
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG PPPPPPPP
Sbjct: 293 GGYSAPAAAPPPPPPPP 309
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 673 GGGGGGGG 696
GGGGGGGG
Sbjct: 26 GGGGGGGG 33
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 676 GGGGGGGXXXXPPXPP 723
GGG GGG PP P
Sbjct: 39 GGGCGGGGGCAPPPAP 54
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG PPPPPPPP
Sbjct: 293 GGYSAPAAAPPPPPPPP 309
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 673 GGGGGGGG 696
GGGGGGGG
Sbjct: 26 GGGGGGGG 33
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 676 GGGGGGGXXXXPPXPP 723
GGG GGG PP P
Sbjct: 39 GGGCGGGGGCAPPPAP 54
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 673 GGGGGGGGXXXXPPXPP 723
G GGGGGG PP PP
Sbjct: 630 GPGGGGGGGPTGPPAPP 646
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG GG PP PP PP
Sbjct: 633 GGGGGGPTGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 673 GGGGGGGGXXXXPPXPP 723
G GGGGGG PP PP
Sbjct: 630 GPGGGGGGGPTGPPAPP 646
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPPP 672
GG GG PP PP PP
Sbjct: 633 GGGGGGPTGPPAPPKPP 649
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 673 GGGGGGGGXXXXPPXPP 723
GGGGG GG PP PP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 673 GGGGGGGGXXXXPPXPP 723
GGGGG GG PP PP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 713 GGXXXXPPPPPPP 675
GG PPPPPP
Sbjct: 514 GGRQRGAPPPPPP 526
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 695 PPPPPPPP 672
PPPPPP P
Sbjct: 521 PPPPPPQP 528
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 713 GGXXXXPPPPPPP 675
GG PPPPPP
Sbjct: 514 GGRQRGAPPPPPP 526
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 695 PPPPPPPP 672
PPPPPP P
Sbjct: 521 PPPPPPQP 528
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
GG GG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPP 678
GG GG PPPPPP
Sbjct: 22 GGGGGGCCAPPPPPP 36
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 679 GGGGGGXXXXPPXPP 723
GGGGGG PP PP
Sbjct: 22 GGGGGGCCAPPPPPP 36
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 719 GXGGXXXXPPPPPPPP 672
G G PPPPPPPP
Sbjct: 58 GGGYGCGIPPPPPPPP 73
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 722 GGXGGXXXXPPPPPPP 675
GG G PPPPPPP
Sbjct: 58 GGGYGCGIPPPPPPPP 73
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 719 GXGGXXXXPPPPPPPP 672
G G PPPPPPPP
Sbjct: 429 GRMGQTAAPPPPPPPP 444
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -1
Query: 710 GXXXXPPPPPPPPXXXXXXXXXXXXGPP 627
G PPPPPPPP PP
Sbjct: 645 GAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -1
Query: 710 GXXXXPPPPPPPPXXXXXXXXXXXXGPP 627
G PPPPPPPP PP
Sbjct: 471 GAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 719 GXGGXXXXPPPPPPPP 672
G GG PPPPPPP
Sbjct: 4 GRGGRYDVCPPPPPPP 19
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 673 GGGGGGGGXXXXPPXPP 723
G GG GGG PP PP
Sbjct: 200 GSGGSGGGSGRFPPPPP 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,956,540
Number of Sequences: 27780
Number of extensions: 125535
Number of successful extensions: 2893
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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