Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_FL5_A16
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor de...    32   2.4  
BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor, n...    32   2.4  
BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor, n...    32   2.4  
AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.              32   2.4  
BC111802-1|AAI11803.1|  465|Homo sapiens CHRNG protein protein.        31   5.6  
Y00762-1|CAA68731.1|  457|Homo sapiens protein ( Human mRNA for ...    30   9.9  
X02502-1|CAA26344.1|  457|Homo sapiens acetylcholine receptor pr...    30   9.9  
S77094-1|AAD14247.1|  457|Homo sapiens nicotinic acetylcholine r...    30   9.9  
BC006314-1|AAH06314.1|  269|Homo sapiens CHRNA1 protein protein.       30   9.9  
AC018890-1|AAY14687.1|  457|Homo sapiens unknown protein.              30   9.9  

>X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor delta
           subunit protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +3

Query: 165 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDXRLSWNAGEWG 326
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +3

Query: 165 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDXRLSWNAGEWG 326
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +3

Query: 165 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDXRLSWNAGEWG 326
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.
          Length = 517

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +3

Query: 165 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDXRLSWNAGEWG 326
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>BC111802-1|AAI11803.1|  465|Homo sapiens CHRNG protein protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = +3

Query: 81  LLTCAIASAAECENTTSLSLMIDSLLATYDRESPPDSKI--VVNLTLHLRHANI---RES 245
           LL  A+   A+  N     L+ D L+  YD    P  +   VVN++L L   N+    E 
Sbjct: 11  LLLLAVCLGAQGRNQEE-RLLAD-LMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNER 68

Query: 246 ESTVRILADLQMNWIDXRLSWNAGEW 323
           E  +     ++M W D RL W+  ++
Sbjct: 69  EEALTTNVWIEMQWCDYRLRWDPRDY 94


>Y00762-1|CAA68731.1|  457|Homo sapiens protein ( Human mRNA for
           muscle acetylcholine receptor alpha-subunit. ).
          Length = 457

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = +3

Query: 81  LLTCAIASAAECENTTSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIRES 245
           LL  ++ SA     +   + ++  L   Y     P  D + VV +T+ L+     N+ E 
Sbjct: 7   LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66

Query: 246 ESTVRILADLQMNWIDXRLSWNAGEWG 326
              V     L+  W+D  L WN  ++G
Sbjct: 67  NQIVTTNVRLKQQWVDYNLKWNPDDYG 93


>X02502-1|CAA26344.1|  457|Homo sapiens acetylcholine receptor
           protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = +3

Query: 81  LLTCAIASAAECENTTSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIRES 245
           LL  ++ SA     +   + ++  L   Y     P  D + VV +T+ L+     N+ E 
Sbjct: 7   LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66

Query: 246 ESTVRILADLQMNWIDXRLSWNAGEWG 326
              V     L+  W+D  L WN  ++G
Sbjct: 67  NQIVTTNVRLKQQWVDYNLKWNPDDYG 93


>S77094-1|AAD14247.1|  457|Homo sapiens nicotinic acetylcholine
           receptor alpha subunit|AChR protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = +3

Query: 81  LLTCAIASAAECENTTSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIRES 245
           LL  ++ SA     +   + ++  L   Y     P  D + VV +T+ L+     N+ E 
Sbjct: 7   LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66

Query: 246 ESTVRILADLQMNWIDXRLSWNAGEWG 326
              V     L+  W+D  L WN  ++G
Sbjct: 67  NQIVTTNVRLKQQWVDYNLKWNPDDYG 93


>BC006314-1|AAH06314.1|  269|Homo sapiens CHRNA1 protein protein.
          Length = 269

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = +3

Query: 81  LLTCAIASAAECENTTSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIRES 245
           LL  ++ SA     +   + ++  L   Y     P  D + VV +T+ L+     N+ E 
Sbjct: 7   LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66

Query: 246 ESTVRILADLQMNWIDXRLSWNAGEWG 326
              V     L+  W+D  L WN  ++G
Sbjct: 67  NQIVTTNVRLKQQWVDYNLKWNPDDYG 93


>AC018890-1|AAY14687.1|  457|Homo sapiens unknown protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = +3

Query: 81  LLTCAIASAAECENTTSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIRES 245
           LL  ++ SA     +   + ++  L   Y     P  D + VV +T+ L+     N+ E 
Sbjct: 7   LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66

Query: 246 ESTVRILADLQMNWIDXRLSWNAGEWG 326
              V     L+  W+D  L WN  ++G
Sbjct: 67  NQIVTTNVRLKQQWVDYNLKWNPDDYG 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,201,840
Number of Sequences: 237096
Number of extensions: 1918627
Number of successful extensions: 4782
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4782
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)