Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_FL5_A04
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 33 1.0
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 33 1.0
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 33 1.0
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 32 2.3
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 32 2.3
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 32 2.3
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 32 2.3
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 32 2.3
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 32 2.3
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 3.1
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 31 4.1
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 31 4.1
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 5.4
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 5.4
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix... 31 5.4
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 31 7.1
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 7.1
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 31 7.1
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 31 7.1
BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein. 30 9.4
BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein. 30 9.4
AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens ... 30 9.4
AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens ... 30 9.4
AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens ... 30 9.4
AK027678-1|BAB55289.1| 203|Homo sapiens protein ( Homo sapiens ... 30 9.4
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PPL S L + P S QPP P P P+ + PG +PP +++P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PPL S L + P S QPP P P P+ + PG +PP +++P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 537 PPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PPL S L + P S QPP P P P+ + PG +PP +++P
Sbjct: 48 PPLTSSLPAAGSK-PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSAYPNSPASSGPGSPFQLPA 219
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 216
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 558 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKP--PLSSEAPSAYLTPS 716
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPA 219
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSPPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 480 HPFILSHYYWRSPPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPY*KEF 656
HP I H W P + PP QP H PP H PS +P PY +
Sbjct: 563 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPY-FDL 618
Query: 657 APGLKPPL 680
GL PL
Sbjct: 619 PAGLMAPL 626
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 480 HPFILSHYYWRSPPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPY*KEF 656
HP I H W P + PP QP H PP H PS +P PY +
Sbjct: 563 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPY-FDL 618
Query: 657 APGLKPPL 680
GL PL
Sbjct: 619 PAGLMAPL 626
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 594 QPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAPSAYLTPSSL 722
+PP + PFP +P +P FAP L+PP +AP + P L
Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 480 HPFILSHYYWRSPPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPY*KEF 656
HP I H W P + PP QP H PP H PS +P PY +
Sbjct: 595 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPY-FDL 650
Query: 657 APGLKPPL 680
GL PL
Sbjct: 651 PAGLMAPL 658
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 480 HPFILSHYYWRSPPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPS-IP*TPY*KEF 656
HP I H W P + PP QP H PP H PS +P PY +
Sbjct: 78 HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQG---PPHINHDDPSLVPNVPY-FDL 133
Query: 657 APGLKPPL 680
GL PL
Sbjct: 134 PAGLMAPL 141
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +3
Query: 510 RSPPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSE 689
++PP + PPL S L P Q P+++ PF P P F+P PP+S
Sbjct: 123 QAPPSPPASPPL-SPLATPSPQAPNALAVHLLQ-APFSPPPSPPVQAPFSPPASPPVSPS 180
Query: 690 APSAYLTPSSL 722
A P SL
Sbjct: 181 ATPPSQAPPSL 191
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 31.1 bits (67), Expect = 5.4
Identities = 25/77 (32%), Positives = 34/77 (44%)
Frame = +3
Query: 516 PPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PP + P S+L P Q+P PP HP TP K P L+PP +P
Sbjct: 3730 PPSSPQEPKRPSQLPSPSSQLPTEAQLPPT--HPG-----TP--KPQGPTLEPPPGRVSP 3780
Query: 696 SAYLTPSSLGMAKGVRP 746
+A +L +KG+ P
Sbjct: 3781 AAAQLADTL-FSKGLGP 3796
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.1 bits (67), Expect = 5.4
Identities = 25/77 (32%), Positives = 34/77 (44%)
Frame = +3
Query: 516 PPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PP + P S+L P Q+P PP HP TP K P L+PP +P
Sbjct: 4035 PPSSPQEPKRPSQLPSPSSQLPTEAQLPPT--HPG-----TP--KPQGPTLEPPPGRVSP 4085
Query: 696 SAYLTPSSLGMAKGVRP 746
+A +L +KG+ P
Sbjct: 4086 AAAQLADTL-FSKGLGP 4101
>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 2 variant protein.
Length = 2704
Score = 31.1 bits (67), Expect = 5.4
Identities = 25/77 (32%), Positives = 34/77 (44%)
Frame = +3
Query: 516 PPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPLSSEAP 695
PP + P S+L P Q+P PP HP TP K P L+PP +P
Sbjct: 1477 PPSSPQEPKRPSQLPSPSSQLPTEAQLPPT--HPG-----TP--KPQGPTLEPPPGRVSP 1527
Query: 696 SAYLTPSSLGMAKGVRP 746
+A +L +KG+ P
Sbjct: 1528 AAAQLADTL-FSKGLGP 1543
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.7 bits (66), Expect = 7.1
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +3
Query: 498 HYYWRSPPYASSHPPLRSRLHQPD-HQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGL-- 668
H + PP PP + HQP H P QPP S P APG+
Sbjct: 66 HQQQQQPP-PQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQD-SSKPVVAQGPGPAPGVGS 123
Query: 669 KPPLSSEAPSAYLTPSSLGMAKGVRP 746
PP SS AP A TP + G G P
Sbjct: 124 APPASSSAPPA--TPPTSGAPPGSGP 147
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 7.1
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +3
Query: 498 HYYWRSPPYASSHPPLRSRLHQPD-HQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGL-- 668
H + PP PP + HQP H P QPP S P APG+
Sbjct: 66 HQQQQQPP-PQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQD-SSKPVVAQGPGPAPGVGS 123
Query: 669 KPPLSSEAPSAYLTPSSLGMAKGVRP 746
PP SS AP A TP + G G P
Sbjct: 124 TPPASSSAPPA--TPPTSGAPPGSGP 147
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.7 bits (66), Expect = 7.1
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +3
Query: 498 HYYWRSPPYASSHPPLRSRLHQPD-HQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGL-- 668
H + PP PP + HQP H P QPP S P APG+
Sbjct: 66 HQQQQQPP-PQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQD-SSKPVVAQGPGPAPGVGS 123
Query: 669 KPPLSSEAPSAYLTPSSLGMAKGVRP 746
PP SS AP A TP + G G P
Sbjct: 124 APPASSSAPPA--TPPTSGAPPGSGP 147
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.7 bits (66), Expect = 7.1
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Frame = +3
Query: 498 HYYWRSPPYASSHPPLRSRLHQPD-HQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGL-- 668
H + PP PP + HQP H P QPP S P APG+
Sbjct: 66 HQQQQQPP-PQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQD-SSKPVVAQGPGPAPGVGS 123
Query: 669 KPPLSSEAPSAYLTPSSLGMAKGVRP 746
PP SS AP A TP + G G P
Sbjct: 124 APPASSSAPPA--TPPTSGAPPGSGP 147
>BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein.
Length = 519
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLEGVRAGVKAS 676
PPSP+I S S +P T+P T+ + + L+G+ +G S
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein.
Length = 561
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLEGVRAGVKAS 676
PPSP+I S S +P T+P T+ + + L+G+ +G S
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>AK128451-1|BAC87447.1| 368|Homo sapiens protein ( Homo sapiens
cDNA FLJ46594 fis, clone THYMU3045692. ).
Length = 368
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +1
Query: 517 PLMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPEXXXXXXXXXXXXXXCHQRLH 696
P MH +T PC +I+P I + HP ++ H S H +H
Sbjct: 23 PPMHPSTHPCTHPFIHPCIHPSTHVSIHPSIHPCIHASIHPSIHPSVHPSMYPFIHSYIH 82
Query: 697 QRISPPRH 720
I P H
Sbjct: 83 PFIHPWIH 90
>AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ90251 fis, clone NT2RM4000115. ).
Length = 561
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLEGVRAGVKAS 676
PPSP+I S S +P T+P T+ + + L+G+ +G S
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ14803 fis, clone NT2RP4001442. ).
Length = 561
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLEGVRAGVKAS 676
PPSP+I S S +P T+P T+ + + L+G+ +G S
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
>AK027678-1|BAB55289.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ14772 fis, clone NT2RP3004332. ).
Length = 203
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLEGVRAGVKAS 676
PPSP+I S S +P T+P T+ + + L+G+ +G S
Sbjct: 129 PPSPSIQGQSVLSYSPSRSPSTSPKFTTSCMTGYSPQLQGLSSGGSGS 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,946,900
Number of Sequences: 237096
Number of extensions: 2812708
Number of successful extensions: 7447
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 6625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7437
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -