Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_P24
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical pr...    81   7e-16
AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical ...    32   0.56 
L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase prote...    29   5.2  
L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase prote...    29   5.2  
Z54238-8|CAA90998.3|  459|Caenorhabditis elegans Hypothetical pr...    28   6.8  

>Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical
           protein T06D8.8 protein.
          Length = 387

 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 41/110 (37%), Positives = 63/110 (57%)
 Frame = -3

Query: 483 DELHKADRQLRQKIAILCXMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEK 304
           D+L K    L  KI ++  ME+A ++ +  R +SF+EIA + +IP DEVE L+MKAL++ 
Sbjct: 268 DDLKKQKDFLTAKIRLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALSKD 327

Query: 303 LIRGHIDQVRSCATVQWVRPXXXXXXXXXXXXXXVDAWREAVSAAADLLA 154
           LIRG I+QV     V WV+P              + AWR  V++   +++
Sbjct: 328 LIRGDINQVEQVVYVTWVQPRVLDNPQIMQMATRISAWRNDVNSMEGIVS 377


>AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical
           protein Y76B12C.7 protein.
          Length = 1454

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 426 MEMAFNKSSSQRKLSFEEIAREARIPLDEVELL--IMKALAEKLIRGHI 286
           +++   +   +RK   ++ A+EA +P DE E L   MK L E+++   I
Sbjct: 810 VDLTVEEEEKERKAKAQQAAKEASVPTDEAEQLNTEMKQLCERVLEAQI 858


>L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase protein
           2, isoform b protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/51 (25%), Positives = 32/51 (62%)
 Frame = -3

Query: 423 EMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRS 271
           ++A +K   +  L +E++++  +I  D ++  +   L+EK++ GH+DQ ++
Sbjct: 28  KVAISKFEPKSYLPYEKLSQTVKIVKDRLKRPL--TLSEKILYGHLDQPKT 76


>L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase protein
           2, isoform a protein.
          Length = 777

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/51 (25%), Positives = 32/51 (62%)
 Frame = -3

Query: 423 EMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRS 271
           ++A +K   +  L +E++++  +I  D ++  +   L+EK++ GH+DQ ++
Sbjct: 28  KVAISKFEPKSYLPYEKLSQTVKIVKDRLKRPL--TLSEKILYGHLDQPKT 76


>Z54238-8|CAA90998.3|  459|Caenorhabditis elegans Hypothetical
           protein T28C6.7 protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = -3

Query: 543 KLYRLETXVPSRGSGPKSNCDELHKADRQLRQKIAILCXMEMAFNKSSSQRKLSFEEIAR 364
           K+++L T + +     +S   E+ ++ + +   +  L   E A N +  Q+K  FE+I R
Sbjct: 315 KVHKLTTELDASEVAKRSLSSEVDESKKLMELMVEDLLQAESAINYNQCQKKAIFEDIDR 374


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,641,571
Number of Sequences: 27780
Number of extensions: 192325
Number of successful extensions: 366
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)