Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_P18
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 221 6e-58
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 5.0
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 28 6.6
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 28 6.6
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 221 bits (539), Expect = 6e-58
Identities = 109/205 (53%), Positives = 135/205 (65%)
Frame = -1
Query: 740 LGXTGNVIGKQSQEPHFRESAIXNESNYYMER*HXAILYSRPDTGKIAVNICFGRHHVLN 561
+ TG VIG+ S++ H NES YYME ++ G+I +NIC+GRHH N
Sbjct: 186 ISHTGRVIGR-SRKNHIPRVGDFNESTYYMESTLGHPVFETK-YGRIGINICYGRHHPQN 243
Query: 560 WMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFT 381
WMM+ NGAEI+FNPSAT+ SE +W +EARNAAI N FT INRVG E FPNEFT
Sbjct: 244 WMMYALNGAEIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGINRVGTEVFPNEFT 301
Query: 380 SADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMT 201
S +G+PAHKD G FYGSSY PDG R P LSR R+G+LIA +DLNL RQ +D + MT
Sbjct: 302 SGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCKDAWGFRMT 361
Query: 200 QRLDMYVNSLSKVLELDYKPQVVHE 126
RLDMY +++V DY+P + E
Sbjct: 362 NRLDMYAQKITEVSNPDYRPDIRRE 386
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 176 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 283
C++TC G S CL S CSG S R ++ ++ C
Sbjct: 35 CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -1
Query: 560 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 396
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +3
Query: 462 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPS 581
SFNV + + G++R + + ++ + +H +QD+ P+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPT 60
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 454 AFLASTFHMYSLPPSPAIVADGL--KTISAPFCPNIIQFKTWCRPKQMFTAILPVSGREY 627
A L + +Y PP P A + +AP PN++ T +Q T ++P + Y
Sbjct: 267 AHLPAPVAIYPTPPPPPAPAPAAPQQASAAPAAPNVMPVCTEIAAEQRHTFMIPPTDPFY 326
Query: 628 RMAXCY 645
M Y
Sbjct: 327 NMIVSY 332
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 454 AFLASTFHMYSLPPSPAIVADGL--KTISAPFCPNIIQFKTWCRPKQMFTAILPVSGREY 627
A L + +Y PP P A + +AP PN++ T +Q T ++P + Y
Sbjct: 627 AHLPAPVAIYPTPPPPPAPAPAAPQQASAAPAAPNVMPVCTEIAAEQRHTFMIPPTDPFY 686
Query: 628 RMAXCY 645
M Y
Sbjct: 687 NMIVSY 692
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,056,752
Number of Sequences: 27780
Number of extensions: 350805
Number of successful extensions: 1065
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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