Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_P14
(829 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 30 0.46
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 29 0.61
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 28 1.4
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.9
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 28 1.9
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 27 2.5
SPCC1223.15c |spc19||DASH complex subunit Spc19|Schizosaccharomy... 27 3.2
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 3.2
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 27 4.3
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 5.7
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 26 5.7
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 26 5.7
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe... 26 7.5
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 7.5
SPAC57A10.11c |tim40||TIM22 inner membrane protein import comple... 25 9.9
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 25 9.9
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 25 9.9
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 9.9
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.9
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 25 9.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 9.9
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 25 9.9
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 9.9
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.9
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 29.9 bits (64), Expect = 0.46
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -2
Query: 504 EAPPPLPWLRSEEXPTVESPKESIENEK---TVRVTRKRKYEEITKPVLREKGQNGRATR 334
E P P + + PTVE+ +E+ K +V + K + E K R K + + +
Sbjct: 400 EVAKPAPVV-APAAPTVEAEVNGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKK 458
Query: 333 QASERKTIKAKKKET 289
+ E+K K KKK++
Sbjct: 459 EKKEKKEKKEKKKKS 473
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 29.5 bits (63), Expect = 0.61
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -2
Query: 495 PPLPWLRSEEXPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERK 316
P W +SE+ ++ K S +K RK++ E+ P +K +N R + + S +K
Sbjct: 691 PARTWFQSEKDK--QASKASEAKDKKSLAKRKKQMEKEEVPRAYKKTKNDRLSNKKSTKK 748
Query: 315 TIKAKKK 295
+ K+K+K
Sbjct: 749 S-KSKRK 754
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 507 REAPPPLPWLRSEEXPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKG-QNGRATRQ 331
RE P SEE V+SP S +E+ RV+ R EE++K ++ G ++G+ R
Sbjct: 442 REMQGPAHPRYSEE---VQSPSRSRYSEEVQRVSEGRLSEEVSKEEEKKGGRESGQHKRM 498
Query: 330 AS 325
AS
Sbjct: 499 AS 500
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = -2
Query: 474 SEEXPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKK 295
S E +V+S E ++NE + + +++KYE + + R++ E +K
Sbjct: 527 STELESVKSENEKLKNELVLEIEKRKKYETNEAKITTVATDLSQYYRESKEYIASLYEKL 586
Query: 294 ETLTLNQQEDQ 262
+ N +E++
Sbjct: 587 DRTERNNKENE 597
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = -1
Query: 448 TQGVDRERKNGPRHSQEEIRGDNQAGAQGEGAKRTRHETSQRTQNDQSEE 299
+Q DR R+NG + + +N E + H TS + D+ E
Sbjct: 1467 SQKSDRWRQNGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDNKRDEVTE 1516
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 27.5 bits (58), Expect = 2.5
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Frame = -2
Query: 519 AVAVREAPPPLPWLRSEEXPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRA 340
AV V LP LR + T P + +K V K E V + + +
Sbjct: 540 AVNVAGETGSLPPLREQTSITSGVPPSN-RLKKHVSTPEKIVEERSIDEVSQSNTPSSKQ 598
Query: 339 TRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSLS--PSEVKSI 193
Q+ + KT+ A T Q + +TR + R S S P VK I
Sbjct: 599 LPQSVDGKTVTANANSTTVAKQPTSNVALTRPKPVRTATSQSKIPKPVKHI 649
>SPCC1223.15c |spc19||DASH complex subunit Spc19|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 152
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 405 RKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLE 226
R+ K+EEI KP+L + Q + + +R+ K K L QE ++ M ++R
Sbjct: 59 RQAKFEEIVKPILSKAFQRLEDSISSLQRQEDSLKTKYEL----QEARLDMLKNRPATSA 114
Query: 225 VSL---SPSEVKSIV 190
S+ S ++K+I+
Sbjct: 115 FSVTTESSEQLKAII 129
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 339 TRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSLSPSE 205
T E I K+ T T+N+ +Q+ M +S E SLS +E
Sbjct: 1611 TEWLQEEVNIMKIKELTSTVNKYREQLAMVQSLNEHAESSLSKAE 1655
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -2
Query: 450 SPKESIENEKTVRVTRKRK--YEEITKPVLREKGQNGRATRQASERKTIKAKKKETLT 283
S +++ +K ++T+K+K +++ K +K ++G + ++ ++K IK K K T
Sbjct: 182 STGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKKIKLKDKPEST 239
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 5.7
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = -2
Query: 453 ESP-KESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLN 277
E+P K+S + E + + K K +PV+ K + ++ + K +K+ KKE L
Sbjct: 64 ETPSKKSQKLETSDALKSKSKDSSKKEPVVVPKKGTPKIFQENHKVKKVKSPKKEKLVGK 123
Query: 276 ---QQEDQMRMTRSRKRRLEVSLSPSEVK 199
++ED + ++K + S +PS +K
Sbjct: 124 NPAEKEDTTDVEDTQKLEQKHSTTPSSLK 152
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 26.2 bits (55), Expect = 5.7
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = -2
Query: 543 QRLMKGXCAVAVREAPPPLPWLRSE--EXPTVESPKESIENEKTVRVTRKRKYEEITKPV 370
Q LM G + R + P L++E E +SP ENE + + +T+
Sbjct: 125 QNLMSGFQMLQRRWSQPKTTTLKTEVKEQQASQSPSVEGENEPAGVKSNEATKPSVTEEK 184
Query: 369 LREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLE 226
+ QN R R + + KK+ ++ +++ + + +L+
Sbjct: 185 EKNAEQNKRRERLSISHIVTELAKKDEVSSESGSNEIVNAKLKNEQLD 232
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/60 (21%), Positives = 32/60 (53%)
Frame = -2
Query: 414 RVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKR 235
R R++ EE + E + +TRQ SER + A++ + + +++D++ ++ ++
Sbjct: 54 RELRQKYEEEQRRQQAMEAKRIAASTRQTSERPPLSAEEAKRIREVKEKDRLESKKNERQ 113
>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 7.5
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = -2
Query: 492 PLPWLRSEEXPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKT 313
P W+ E P V P ES++ + + E +L K Q A +++S T
Sbjct: 317 PSNWIALEALPLVSIPNESLDESDELAESLSDS-EAARLQLLGIKKQESVAKKKSSFPST 375
Query: 312 IKAKKKETL 286
IK + TL
Sbjct: 376 IKDQPNLTL 384
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 7.5
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = -2
Query: 474 SEEXPTVESPKESIEN------EKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKT 313
SEE P E S+++ ++ +K++ EEI + E RQ +ER+
Sbjct: 31 SEEKPQKELSDASVKSSYVDQEQQAYENWKKQEQEEINRKKEEELKSKFEKLRQKNERRR 90
Query: 312 IKAKKKETLTLNQQEDQMRMTRSR 241
K TL +++DQ+ +R
Sbjct: 91 RTQGKTLAETLAEEDDQIDANDTR 114
>SPAC57A10.11c |tim40||TIM22 inner membrane protein import complex
subunit Tim40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 313
Score = 25.4 bits (53), Expect = 9.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 402 KRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLTLNQQEDQM 259
++K T+P EKG+ AT ++ +KT K K N +Q+
Sbjct: 115 EKKMTSETQPSTDEKGRKVSATENSAPKKTDKEKSSGETAGNILREQI 162
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 25.4 bits (53), Expect = 9.9
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -2
Query: 495 PPLPWLRSEEXPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASE 322
PP L ++E +++ +E ++ + T+KR +E K REK + +A ++
Sbjct: 82 PPEEMLETKEEESLKHAREENDDLHLDKETKKRLKKEKKKAARREKEEARKAKADTTQ 139
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 9.9
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = -2
Query: 345 RATRQASERKTIKAKKKETLTLNQQEDQMRMTRSRKRRLEVSLSPSEVKS 196
R + E+K +++ +KE + N + Q+ + ++ R+ SPS++KS
Sbjct: 21 RQLNEIQEKKRLRSAQKEASSENAEVIQVPRSPPQQVRVLTVSSPSKLKS 70
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.4 bits (53), Expect = 9.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 335 LVARPFCPFSLSTGLVISSYFLLRVTRTVFSFSIDSL 445
L+A F F L GLVI F+L + +D+L
Sbjct: 1930 LLAAHFSRFELPPGLVIDQKFILTRVHNLLGACVDTL 1966
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 444 KESIENEKTVRVTRKRKYEEI 382
+E IE E T++ + ++KYEEI
Sbjct: 162 RERIEWENTIQTSSQQKYEEI 182
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 9.9
Identities = 13/68 (19%), Positives = 34/68 (50%)
Frame = -2
Query: 471 EEXPTVESPKESIENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKE 292
++ + + +E +E E+ + +K R K +NG A+++ + R+T+ + E
Sbjct: 70 DDEESAQVDEEELEEEEEEEEDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDSE 129
Query: 291 TLTLNQQE 268
L ++++
Sbjct: 130 NLEGDEED 137
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 9.9
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -2
Query: 573 PXAXGEKSTHQRLMKGXCAVAVREAPPPLPWLRSEEXPTVESPKE 439
P S R G A PPPLP PT E PK+
Sbjct: 945 PTKLTRPSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKD 989
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.4 bits (53), Expect = 9.9
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = -1
Query: 487 PVVEKRGKXDGRVTQGVDRERKNGPRHSQEEIRGDNQAGAQGEGAKRTRHETSQRTQNDQ 308
PV KR ++T+ V + + NG R S+ + A + + +++ +QN
Sbjct: 635 PVRRKRSNSITQLTEFVKQPKINGQRESR--------SAAAARKKEESGNKSQSNSQNSL 686
Query: 307 SEEKGN 290
S+E GN
Sbjct: 687 SDESGN 692
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 9.9
Identities = 19/82 (23%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = -2
Query: 456 VESPKESI--ENEKTVRVTRKRKYEEITKPVLREKGQNGRATRQASERKTIKAKKKETLT 283
+++ K+S+ + +T + T K++ +E + L + +N +T++ S+ +K + E
Sbjct: 368 LKNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDY--LKTEYDE--- 422
Query: 282 LNQQEDQMRMTRSRKRRLEVSL 217
E++++ SRK+ +E+SL
Sbjct: 423 ---MENELKAKLSRKKEIEISL 441
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 513 AVREAPPPLPWLRSEEXPTVESPKESIENEKTVRVTRKR 397
++R PP + ++E P V P+E N+ RKR
Sbjct: 28 SLRALPPDVKQNKTEPIPFVPKPEEGSSNKSNSSKFRKR 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,621,775
Number of Sequences: 5004
Number of extensions: 44006
Number of successful extensions: 183
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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