Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP12_T7_P12
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 234 6e-62
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 234 6e-62
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 234 6e-62
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 234 6e-62
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 234 6e-62
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 234 6e-62
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 234 6e-62
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 234 6e-62
AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 777 QKKAHIMEIQXNGVPSRTKVKWXREHLGETYPCRXCACPKMK*XTALVSPKGKXYKGVTS 598
QKKAH++EIQ NG KV W REHL + T V+ +G +KGVTS
Sbjct: 175 QKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT-RGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 777 QKKAHIMEIQXNGVPSRTKVKWXREHLGETYPCRXCACPKMK*XTALVSPKGKXYKGVTS 598
QKKAH++EIQ NG KV W REHL + T V+ +G +KGVTS
Sbjct: 175 QKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT-RGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 777 QKKAHIMEIQXNGVPSRTKVKWXREHLGETYPCRXCACPKMK*XTALVSPKGKXYKGVTS 598
QKKAH++EIQ NG KV W REHL + T V+ +G +KGVTS
Sbjct: 77 QKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT-RGHGFKGVTS 135
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 136 RWHTKKLPRKTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -3
Query: 627 KGKXYKGVTSRWHTKKLPRKTHQG 556
+G +KGVTSRWHTKKLPRKTH+G
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 777 QKKAHIMEIQXNGVPSRTKVKWXREHLGETYPCRXCACPKMK*XTALVSPKGKXYKGVTS 598
QKKAH++EIQ NG KV W REHL + T V+ +G +KGVTS
Sbjct: 175 QKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT-RGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 777 QKKAHIMEIQXNGVPSRTKVKWXREHLGETYPCRXCACPKMK*XTALVSPKGKXYKGVTS 598
QKKAH++EIQ NG KV W REHL + T V+ +G +KGVTS
Sbjct: 77 QKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT-RGHGFKGVTS 135
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 136 RWHTKKLPRKTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -3
Query: 627 KGKXYKGVTSRWHTKKLPRKTHQG 556
+G +KGVTSRWHTKKLPRKTH+G
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 234 bits (572), Expect = 6e-62
Identities = 110/165 (66%), Positives = 132/165 (80%)
Frame = -1
Query: 584 RSYPVRHTKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 405
+ P + KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 225
NN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354
Query: 224 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 74.1 bits (174), Expect = 1e-13
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 777 QKKAHIMEIQXNGVPSRTKVKWXREHLGETYPCRXCACPKMK*XTALVSPKGKXYKGVTS 598
QKKAH++EIQ NG KV W REHL + T V+ +G +KGVTS
Sbjct: 175 QKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT-RGHGFKGVTS 233
Query: 597 RWHTKKLPRKTHQG 556
RWHTKKLPRKTH+G
Sbjct: 234 RWHTKKLPRKTHKG 247
>AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical
protein R02D3.7 protein.
Length = 479
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -2
Query: 154 RRLTRLHSWVHS--RRIVFA----KKLRLPQPQRGCCAALSVVRENKHLTMQKK 11
R +T++H+W + ++ A KK R CC + R KHL KK
Sbjct: 32 RHMTQIHNWTTEDCQELIAAIKSEKKSRASSTSFVCCHCRMIFRSVKHLVQHKK 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,996,337
Number of Sequences: 27780
Number of extensions: 419326
Number of successful extensions: 1116
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -