Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP12_T7_P06
         (1120 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     26   6.9  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    26   7.0  
BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        26   7.2  
AF131284-1|AAD42962.1|  645|Homo sapiens membrane type 5 matrix ...    26   9.4  
AB021227-1|BAA82967.1|  645|Homo sapiens membrane-type-5 matrix ...    26   9.4  
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    26   9.4  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                26   9.6  

>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 25.8 bits (54), Expect(2) = 6.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 31  PXPPPPPXPP 2
           P PPPPP PP
Sbjct: 602 PPPPPPPPPP 611



 Score = 23.8 bits (49), Expect(2) = 6.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 40  LXXPXPPPPPXP 5
           L  P PPPPP P
Sbjct: 584 LPPPPPPPPPPP 595


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 25.8 bits (54), Expect(2) = 7.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 31  PXPPPPPXPP 2
           P PPPPP PP
Sbjct: 493 PPPPPPPPPP 502



 Score = 23.8 bits (49), Expect(2) = 7.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 40  LXXPXPPPPPXP 5
           L  P PPPPP P
Sbjct: 475 LPPPPPPPPPPP 486


>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 25.8 bits (54), Expect(2) = 7.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 31  PXPPPPPXPP 2
           P PPPPP PP
Sbjct: 184 PPPPPPPPPP 193



 Score = 23.8 bits (49), Expect(2) = 7.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 40  LXXPXPPPPPXP 5
           L  P PPPPP P
Sbjct: 166 LPPPPPPPPPPP 177


>AF131284-1|AAD42962.1|  645|Homo sapiens membrane type 5 matrix
          metalloproteinase protein.
          Length = 645

 Score = 25.8 bits (54), Expect(2) = 9.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 31 PXPPPPPXPP 2
          P PPPPP PP
Sbjct: 11 PGPPPPPPPP 20



 Score = 23.4 bits (48), Expect(2) = 9.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 67 IPRFXD*RTLXXPXPPPPP 11
          +PR    R    P PPPPP
Sbjct: 1  MPRSRGGRAAPGPPPPPPP 19


>AB021227-1|BAA82967.1|  645|Homo sapiens membrane-type-5 matrix
          metalloproteinase protein.
          Length = 645

 Score = 25.8 bits (54), Expect(2) = 9.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 31 PXPPPPPXPP 2
          P PPPPP PP
Sbjct: 11 PGPPPPPPPP 20



 Score = 23.4 bits (48), Expect(2) = 9.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 67 IPRFXD*RTLXXPXPPPPP 11
          +PR    R    P PPPPP
Sbjct: 1  MPRSRGGRAAPGPPPPPPP 19


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 25.8 bits (54), Expect(2) = 9.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 31  PXPPPPPXPP 2
           P PPPPP PP
Sbjct: 521 PPPPPPPGPP 530



 Score = 23.4 bits (48), Expect(2) = 9.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 43  TLXXPXPPPPPXP 5
           T   P PPPPP P
Sbjct: 515 TRGAPPPPPPPPP 527


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 25.8 bits (54), Expect(2) = 9.6
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 31  PXPPPPPXPP 2
           P PPPPP PP
Sbjct: 392 PPPPPPPGPP 401



 Score = 23.4 bits (48), Expect(2) = 9.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 43  TLXXPXPPPPPXP 5
           T   P PPPPP P
Sbjct: 386 TRGAPPPPPPPPP 398


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,480,348
Number of Sequences: 237096
Number of extensions: 374101
Number of successful extensions: 10484
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7427
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15534614606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)